Maricaulis maris: Mmar10_1296
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Entry
Mmar10_1296 CDS
T00394
Name
(GenBank) RNAse E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mmr
Maricaulis maris
Pathway
mmr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mmar10_1296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmr03019
]
Mmar10_1296
03009 Ribosome biogenesis [BR:
mmr03009
]
Mmar10_1296
Enzymes [BR:
mmr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
Mmar10_1296
Messenger RNA biogenesis [BR:
mmr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Mmar10_1296
Ribosome biogenesis [BR:
mmr03009
]
Prokaryotic type
rRNA processing factors
Mmar10_1296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
TMEM106_N
Pput2613-deam
DUF5351
Motif
Other DBs
NCBI-ProteinID:
ABI65588
UniProt:
Q0AQ49
LinkDB
All DBs
Position
complement(1411164..1413836)
Genome browser
AA seq
890 aa
AA seq
DB search
MSKKMLIDAGHPEETRVVVLDGSKVEDFDFEAAARRPIRGNIYLAKVTRVEPSLQAAFVE
YGGNRHGFLAFNEIHPDYYQIPFEDRQALAEEEASAADDEDDEVEETKSESVRSADNASE
DADGEGEAEAPETIGDDSEDDDISDQQAARRRRQMFRKYKIQEVIKRRQILLVQVAKEER
GNKGAALTTYLSLAGRYCVLMPNTPRGGGISRKISNASDRKRLKSVVSELELPKGVGLII
RTAGASRTKTEIKRDADYLLRLWTNIRELTLSSVAPSLIYEEGNLVKRVIRDLYDKEIDS
VLVEGEEAYKEAKAFMKMLMPSHAKKVQHYKEAVPLYLRHQCEAQLEAIYSDVAPLKSGG
YLVINPTEALVSIDVNSGKSTRERNIEATALKTNLEAAAEAARQMRLRDLAGLIVIDFID
MDENKNNRAVEKKMKDMLKRDRARLQVGRISQFGLMEISRQRRRSSLLEGSTTTCPTCKG
SGHLRSTESSALVALRGLEKEGTRGRAKRIRISVPTAVAIYLLNDKRDHLLMIEQRFSMS
IAVTADDTILAPEFSIEALENREPGEELVMAPLSVESIEEIEIPDVPEEDDSDTDDEQEG
REASGGRRRRRRRRRKPSSDDTTAAMEVVNVEAEDSDEGDNADKAESRRDGSGEDDDDQP
RRRRRRGRRGGRGRRRTEGETNGEEAVAGEASADAPASDAPASDTANPDSSATEASAEAE
PSADAAEQAPKRKRAPRRRSTKAATNDEAAASSDAETSTEPAADAGPADAVAEDAPKKRT
RRPRKKAADPAPEAADTEAAATEADSPAAEPAKAEETPKPKRRTRRKKVEEPVATDEPAA
EASAPAPQADPTESGAEPRDTQADKTDEAAEDDGKPKRRGWWNRTGLFGN
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagaaaatgctgatcgacgcaggtcatcccgaggagacccgcgtcgtcgtactc
gacggttcgaaggttgaggattttgattttgaagcggccgctcgccgccccatccgcggc
aacatctatctcgcgaaagtaacgcgggtcgagccgtcgctgcaggcggccttcgtggaa
tatggtggcaatcgtcacggcttcctggccttcaatgaaatccacccggactattatcaa
atccccttcgaggaccgtcaggccctcgccgaggaagaagcctctgcggctgacgacgag
gacgacgaggtcgaagagaccaagtccgaatcggtgcggtctgccgacaatgcctccgag
gatgcggacggcgaaggtgaggccgaggcacctgaaaccattggcgatgacagcgaagac
gacgacatcagcgaccagcaggctgcccgccgccgtcgccagatgttccgcaaatacaag
atccaggaagtcatcaaacggcgccagatcctgctggtccaggtggccaaggaagagcgc
ggcaacaagggcgcagccctgacgacctatctgtcgctggccggtcgctattgcgtgctg
atgccgaacacgcctcgcggcggtggcatttcccgcaagatttccaatgcctctgaccgc
aagcgtctgaaatctgttgtatccgagctcgaactgcccaagggcgtcggcttgatcatc
cgcacggcgggtgcctcgcgcaccaagaccgagatcaagcgggatgccgactacctgctg
cgcctgtggacgaatatccgcgagctgacgctgagttcggtggcaccgtcgctgatctat
gaagaaggcaatctggtcaaacgcgtcatccgtgacctgtatgacaaggaaatcgactcg
gtcctggtggaaggcgaagaggcctacaaggaggcgaaagccttcatgaagatgctgatg
ccgagccatgccaagaaggttcagcactacaaggaagccgtcccgctctatctgcgccat
caatgtgaggcccagctcgaggcgatttattctgatgtcgccccgctcaaatccggcggc
tatctggtgatcaatccgaccgaggccctggtctcgatcgacgtgaactccggcaaatcg
acgcgcgagcggaatattgaagccaccgcgctgaaaacgaatctggaagccgcagcggaa
gctgcgcgccagatgcgcctgcgtgacctggccggtctgatcgtcatcgacttcatcgac
atggacgagaacaagaataatcgtgccgtcgagaagaagatgaaggacatgctcaagcgt
gaccgggcccgcctgcaagtgggtcggatctcgcaattcgggctgatggaaatttcccgc
caacgccgccggtccagcctgctcgaaggctccacgacgacctgcccgacctgtaagggc
agcggccatctgcgttcgactgaatcgagtgcactggttgccctgcgtggcttggaaaag
gaaggcacacgcggccgcgccaagcggattcgcatttcggtgccaaccgccgtcgcgatc
tatctgttgaacgacaagcgcgatcacctcctgatgatcgagcaacgcttttcgatgagt
atcgccgtcacggcggacgacacgatcctggcaccggaattctcgatcgaagcgctggaa
aaccgcgaaccgggcgaagagcttgtcatggccccgctgtcggtcgaatcgatcgaggag
atcgagatcccggacgttccggaagaggacgactcggacactgacgacgaacaggaaggc
cgcgaagcctcgggtgggcgccgtcgccgtcgtcgccgccgtcgcaagccgtcttccgat
gacaccacggccgccatggaagtggtcaatgtcgaggccgaggacagcgatgagggcgac
aatgccgacaaggcagaaagccgtcgtgatgggtcgggtgaggacgatgatgaccaaccc
cgtcgtcgccgccgtcgcggccggcgtggtggccgtggtcgtcgccggaccgaaggcgag
accaatggcgaggaagccgtagccggcgaagcgtcagccgacgcgccagcctcagatgcg
ccggcttccgacaccgccaatccggacagctcagcgaccgaagcgtcggccgaagccgaa
ccgtctgcggacgcggctgagcaagcccccaagcgcaaacgcgcgccgcgtcggcgttcg
acaaaggcagcgacaaatgacgaggctgcggcttcgtccgatgcggaaaccagcaccgag
ccagccgcagatgcgggcccggccgacgctgtggcagaggacgcgccgaagaaacggacc
cgccgcccgcgcaaaaaggctgcagatccggcccctgaggctgccgataccgaagcagca
gcgaccgaagcggacagcccggccgcagaaccggccaaggctgaagagactcccaagccg
aagcgtcgtacccgacgcaagaaggttgaagagcctgtcgcaacggacgagccggcggct
gaagcatccgcgccggccccgcaggcggacccgacggaatccggggccgagccacgtgat
acccaagccgacaagacggacgaggctgccgaagatgatggcaagccgaagcgccgcggt
tggtggaaccggaccggattgttcggaaactga
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