Maricaulis maris: Mmar10_1351
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Entry
Mmar10_1351 CDS
T00394
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mmr
Maricaulis maris
Pathway
mmr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mmar10_1351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmr03019
]
Mmar10_1351
Enzymes [BR:
mmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Mmar10_1351
Messenger RNA biogenesis [BR:
mmr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mmar10_1351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
ABI65643
UniProt:
Q0APZ4
LinkDB
All DBs
Position
1480487..1481845
Genome browser
AA seq
452 aa
AA seq
DB search
MTQFSDLGLAEPILRALNDEGYETPTPIQREVIPAMIEGRDIVGIAQTGTGKTASFVLPI
LNRLIEENRPTHPKTCRALILSPTRELSAQILENVRGYSRHMRVSSTLVVGGVKPGPQIR
ALSKGVDVLVATPGRLLDLMQSGAVKLSETKILILDEADQMLDLGFFPAIRKIVSFLPNK
RQTALLSATMPKPIRALAQEMLDDPKEVSVAPASRPIERIEQSVVLLPKESKKDLLLELM
SDRAVERAIVFSRTKHGADKINRHLVDYGLKSAAIHGNKSQAQRIKALDGFKTGAVKILV
ATDIAARGIDVDNVSHVVNHDLPNLPESYVHRIGRTARAGKSGVAVSMCEPGEYEYLRDI
ERLTGLDIDRVFVGDEAKFLAEAKNATPAASQKKQQRPARKKPFTAGRARPQGQGNGGSR
GGGQGGGQGGGQGGGSKRPRRRNNRSGARSPA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
ttgacccagttttctgatctcggcctggccgagcccattctgcgcgctttgaacgatgag
ggttatgagaccccgaccccgatccagcgcgaagtcatcccggcgatgattgaaggccgt
gacatagtcggcattgcgcaaaccggcaccggaaagaccgcatccttcgtgctgccgatc
ctcaatcgcctgatcgaggagaaccggcccacccatccgaaaacctgccgggcgctgatc
ctgtcgccaacccgcgagctgtcagcccagattctcgagaatgttcgcggctatagccgt
catatgcgggtatcctcgaccctggtcgtgggcggcgtgaagcccgggccgcaaatccgt
gccctgtcgaagggcgtcgacgtcctggtcgccactccgggacgcctgctcgacctgatg
cagtccggcgccgtcaagctgagcgagacgaaaatcctgatcctggacgaagccgaccag
atgctggatctcggcttcttcccggctatccgcaagattgtcagcttcctgccgaacaag
cgccagacggccctgctgtcggcgaccatgcccaagccgatccgcgccctggcgcaggaa
atgctggacgaccccaaggaagtctcggtcgcgccggcctcacgtccgatcgagcgtatc
gagcaatcagtggtgctcctgcccaaggagtccaagaaggacctcctgctggagctgatg
tcggatcgcgccgtcgagcgtgccatcgtcttttcgcggaccaagcatggcgccgacaag
atcaaccggcacctggtcgattatggtctcaagtctgctgccattcatggcaacaagtcg
caggcccagcggatcaaggcgctggacggtttcaagaccggtgcggtcaagatcctcgtc
gcgactgacatcgcggcgcgcggtatcgatgtcgacaatgtttcccacgtcgtcaatcac
gacctgcccaacttgccggaatcctatgtccaccgaattggtcggacggcacgggccggc
aagtccggcgtcgcggtctcgatgtgtgagccgggggagtatgaatatctgcgcgatatc
gagcgcctgaccgggctcgatatcgatcgggtcttcgtcggtgacgaagcgaaattcctc
gccgaggccaagaatgccacgccggccgcgtcgcagaagaagcaacagcgcccggcccgc
aagaagcccttcacggccggtcgcgcccggccgcagggacagggtaatggcggcagccgc
ggtggcggccagggtggtggccaaggcggtggtcagggcggcggatccaaacgtccccgc
cgccgcaataaccgctccggcgctcgttcgccggcctga
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