Maricaulis maris: Mmar10_1506
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Entry
Mmar10_1506 CDS
T00394
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mmr
Maricaulis maris
Pathway
mmr03410
Base excision repair
mmr03430
Mismatch repair
mmr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mmar10_1506
03430 Mismatch repair
Mmar10_1506
03440 Homologous recombination
Mmar10_1506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmr03400
]
Mmar10_1506
DNA repair and recombination proteins [BR:
mmr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Mmar10_1506
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Mmar10_1506
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Mmar10_1506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
DUF6211
Collar
Motif
Other DBs
NCBI-ProteinID:
ABI65798
UniProt:
Q0API9
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All DBs
Position
complement(1657225..1659036)
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AA seq
603 aa
AA seq
DB search
MLDQTLNETDGSSPLLGVSRSLSGKRWRLREADDGAVAMMARQQSIPDALARVMAARGVA
PDQAAAFLSPRLRDSFPDPSDFADMDKAAGLVWDAIEAERPMAVFADYDVDGATSAAQLI
RYFRHFDRTAEIYVPDRVEEGYGPSGTAFDTLKARGAELVITVDCGAAARIALTHAASIG
LDVIVIDHHLMDDDMPPAAALVNPNRPDDRSGCGHLAAAGVTFVFLAALNREGRRRGTIT
PDNEPSLLDWIDLAALGTICDVVPLTGVNRAITAQGLKAMSGWRHLGLRCLAETSGVDGE
ASTYHAGFLIGPRINAGGRVGRADLGATLLTTEDETLARRIAGELDGLNSERRAIEADVL
EAASAQLDGQSADRAILIAAGEGWHPGVIGVVAGRLKERFDKPVIVIGIDREARPPVGKG
SGRSVPGVNLGGAIAAAREAGLLTSGGGHAMAGGLSMDPDRITELVAFLDERLAPELAAA
ADDMALKADGVLTASGVSLDLARMLERAAPFGQGNAEPRFALPDMRVSFAKRVGTDHVRF
TLSDPDGRRVDGICFRCADTPIGEALLAAGPGLFHAFGRLKLDAWQGRERVQLHLEDLST
AAR
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaccagacgctgaatgaaacagacggctcatctccactactgggggtgagccgt
tcgctttccggcaagcgctggcgcctgcgtgaagccgacgacggggcggttgccatgatg
gcccgccagcaatccatcccggacgccctggcccgtgtgatggcggcgcgaggggtcgcc
ccggatcaggctgcagcctttctgtctccgcgcttgcgcgacagcttccctgacccctcc
gacttcgccgacatggacaaggcggcggggcttgtctgggatgcaatcgaagccgagcgc
cccatggcggtgttcgctgactatgatgtcgacggcgccacctcagccgcccagctgatc
cgctattttcgccatttcgaccggacggccgagatttacgtgccggaccgggtggaggag
ggctacggcccgtcaggcaccgctttcgataccttgaaggcacgtggcgccgagctggtc
atcacggtggattgcggcgcggcggccaggattgcactgacccacgcggcctccatcggt
ctcgacgtgattgtgatcgaccatcacctgatggacgatgacatgccgcccgccgccgcg
ctcgtgaaccccaatcggcccgacgaccgttcgggctgtggccatctggcggctgccggc
gtgaccttcgtcttcctcgctgcgctgaaccgtgaggggcgccggcggggtacaatcaca
ccagacaatgaacccagcctgctcgactggatcgatctggcggccctcggtacgatctgc
gacgtggtgcccttgaccggggtcaaccgggcgatcaccgcccagggcctcaaggccatg
agtggctggcgccatctcgggctgcgttgtctcgccgaaacctcgggtgttgacggtgaa
gccagcacctatcatgccggctttctgatcgggccgcgtatcaatgccggtggccgggtc
ggtcgggccgatcttggcgcgaccttgctgacaaccgaagatgagacgctcgccaggcgc
attgccggtgaactggacggcctcaattccgaacgccgggcgatcgaagccgacgtcctg
gaagccgcctcggcccagctcgacgggcaatcggcggaccgcgccatcctgattgccgca
ggcgaggggtggcaccccggcgtgattggcgttgtcgccggccgcctcaaggaacgcttc
gacaagccggttatcgtgatcggcatcgatcgcgaagcccggccgcctgttggcaagggg
tcaggccggtcggtgcctggcgtcaatctgggcggcgccattgcggcggcccgggaagcc
ggattgctgacgtccggcgggggtcacgccatggcgggcgggttgagcatggacccggac
cggattaccgaactggtcgcttttctcgatgagcgcctggcgccagaattggccgccgct
gctgatgacatggcgctgaaggccgacggggtcctgaccgcgtccggtgtctcgcttgac
ctcgcacgcatgctcgagcgcgccgcgccattcggtcagggcaatgccgagccgcggttt
gcgctgccagacatgcgggtcagtttcgccaagcgggtcggcaccgaccatgtccgcttc
accttgagtgatccggacggccgacgcgttgacgggatttgttttcgctgtgctgacacg
ccaatcggggaggccctgctggccgccggcccgggcttgttccatgcctttggacgtctt
aagcttgatgcttggcagggccgtgagcgcgtccagctgcaccttgaagatctttctact
gcagctcgatga
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