Janthinobacterium sp. Marseille: mma_0135
Help
Entry
mma_0135 CDS
T00561
Symbol
ada
Name
(GenBank) methylated-DNA-[protein]-cysteine S-methyltransferase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mms
Janthinobacterium sp. Marseille
Pathway
mms03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
mma_0135 (ada)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mms03000
]
mma_0135 (ada)
03400 DNA repair and recombination proteins [BR:
mms03400
]
mma_0135 (ada)
Enzymes [BR:
mms01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
mma_0135 (ada)
Transcription factors [BR:
mms03000
]
Prokaryotic type
Helix-turn-helix
AraC family
mma_0135 (ada)
DNA repair and recombination proteins [BR:
mms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
mma_0135 (ada)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
ABR90047
LinkDB
All DBs
Position
145597..147096
Genome browser
AA seq
499 aa
AA seq
DB search
MDMQKPHLVPDPGQLVPASCYRALAAKDARFDGVFFVGVKTTGIYCRPVCSVKTPRESSC
TYFSTAAAAEAAGFRPCLRCRPELAPYALQQNLAYAVWQRIAAGALNDGDTERLSAEVGL
SSRQLRRVLLEHFGVTPVELAQTQRLLFAKKLLQETHLPMSDVAYAAGFGSIRRFNALFL
ARYGMAPTSIRRAAGVPSKLGEDAITLRLAYRPPYAWEPMLAYLAGRAIPGVEGVVEDAP
GTLSYVRSVMLNNTAGWLRVTHLPARRQLELSLPATLAPVLMPLLARVRKQFDLDANPEI
IAAHLSADALLAQQIRLTPGLRVPGTFDTFELAIRAVLGQQVSVAGATTVSGRLVKAFGE
PADTPFIGINRHFPTAERLAAADIGEIAALGMPGSRAQTIQNVARFAVQGGLQMKPGASL
DECVSSLKTVRGIGEWTAQYVAMRALRFPDAFPTGDLGLQKAAVEVAGGTRLTEKQLLLR
AAGWSPWRAYTALLLWHSL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggatatgcagaaaccccatcttgttccagatcccggccagctcgtcccggcgagttgc
tatcgcgcattggcggccaaggatgcgcgtttcgacggtgtgtttttcgtcggcgtgaaa
acgacaggtatttattgtcgccccgtctgttccgtcaaaaccccacgcgaatcttcctgt
acttacttcagcaccgcggcggccgccgaggctgccggtttccgcccctgcctgcgctgt
cgtcccgagcttgcaccatatgccctgcagcaaaacctggcttatgcggtgtggcaaagg
atagctgccggtgccctgaatgacggcgataccgaaagattgtcggcggaagtcggtttg
tcatcgcggcaattgcgacgcgtcttgctcgaacactttggtgtgacacctgttgaattg
gcgcaaacgcagcgcctgctgttcgcgaaaaagttgctacaggaaacccatttgccgatg
agcgacgtagcgtacgccgccggcttcggcagcatccggcgtttcaatgccttgttcctg
gcgcgctacggcatggcaccgaccagcatacggcgcgccgcaggtgtgccgtccaaactg
ggcgaggatgcgattacgctgcggctggcttaccgcccgccgtatgcatgggagcccatg
ctggcttatctcgccgggcgtgcgataccgggtgtggaaggtgtggtcgaggatgcgccg
ggcaccctgtcgtatgtgcgcagcgtcatgttgaataacactgcgggctggttgcgcgtg
acgcatttaccggcgcgcaggcagttggagttatcgctgcctgccacccttgcgccggta
ctcatgcctttgctggcacgtgtacgcaagcagttcgacctcgacgcgaatccggaaatc
attgcggcccatctgtcggccgatgctttgctggcgcagcagatcaggctgacgccgggt
ttgcgtgtgccgggtaccttcgatacttttgaactggcgattcgtgcggtactcgggcaa
caagtcagtgtggccggtgcgacgacggtatccggtcgtttggtcaaagcctttggtgag
ccggccgatacacctttcatcggtatcaatcgccattttccgacggcggaaagattggcc
gctgcggacatcggcgagatcgccgcgctgggtatgcctggttcacgcgcacagaccata
cagaacgtggcccgtttcgcagtacaggggggcttgcagatgaagccgggagcatcactg
gatgagtgtgtcagcagcctgaagaccgtacgcggtatcggtgaatggactgcgcagtat
gtggcgatgcgtgcgctacgtttccctgacgcttttccgaccggcgaccttggtttgcaa
aaggccgcagtggaagtggcaggcggtacgcgcctgacggaaaagcaattgctgctgcgt
gcggccggctggtcgccatggcgtgcatataccgctttgttgttatggcattcgctttga
DBGET
integrated database retrieval system
