Janthinobacterium sp. Marseille: mma_0275
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Entry
mma_0275 CDS
T00561
Symbol
fadD
Name
(GenBank) long-chain fatty-acid-CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mms
Janthinobacterium sp. Marseille
Pathway
mms00061
Fatty acid biosynthesis
mms00071
Fatty acid degradation
mms01100
Metabolic pathways
mms01212
Fatty acid metabolism
mms02024
Quorum sensing
mms04146
Peroxisome
Module
mms_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mms00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
mma_0275 (fadD)
00071 Fatty acid degradation
mma_0275 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
mma_0275 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
mma_0275 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mms01004
]
mma_0275 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mms04147
]
mma_0275 (fadD)
Enzymes [BR:
mms01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
mma_0275 (fadD)
Lipid biosynthesis proteins [BR:
mms01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
mma_0275 (fadD)
Exosome [BR:
mms04147
]
Exosomal proteins
Exosomal proteins of breast milk
mma_0275 (fadD)
Exosomal proteins of breast cancer cells
mma_0275 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ABR88609
UniProt:
A6SUL8
LinkDB
All DBs
Position
309994..311676
Genome browser
AA seq
560 aa
AA seq
DB search
MDKFWLKSYPEGIPAEIDPARYGSLVELLDESFQKYADRNACVCMDKALTYREVDHLSTE
VGAWLQSIGLQKGARVALMMPNVLQYPIAIAAVLRAGYVIVNVNPLYKPRELEHQLTDSG
AEAIIILENFAATLEKVIASTQVKHVIVATMGDLFGGLKGGIVNFVVRHVKKMVPAYSLP
QAVPFKEVLRQAAGMTLQRPALGHQDLAFLQYTGGTTGTAKGAMLTHRNIIANVLQNEAW
ISPVLNTLPKDKQLIFVCALPLYHIFALTTCGMLGTHLGVMNLLIPNPRDIPGFIKELMK
YKVHFLPAVNTLYNGLLNNPDFAKVDFSELKLCNGGGMAVQKVVNDKWREVTGCAICEGY
GLSETSPTATANPPTTNEFTGTIGLPVSSTELKIIDSDDNEVPHGSAGEIAIRGPQVMAG
YWNNPVETAQSMTADGFFKTGDIGIMDERGFTKIVDRKKDMILVSGFNVYPSEIEGVVAA
HPGVLECACIGVPDEHTGEAVKLFVVRRDPALTEAELMAYCREQFTGYKKPKSIEFRTEL
PKSNVGKILRRELRDEKKPA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggacaaattttggctcaagtcatatccggaaggcataccggcagaaatcgatcctgcg
cgttatggttccctggttgaattgctggatgaatccttccagaaatatgcagatcgcaat
gcttgcgtctgcatggataaagcactcacttatcgtgaggtggatcatctgtccaccgaa
gtgggggcatggctgcaaagcataggtttgcaaaaaggtgcgcgcgtcgcgctgatgatg
ccgaatgtcttgcagtatccgatcgcgattgccgcggtgctacgcgccggttatgtgatc
gtcaatgtcaatccgctgtacaagccacgcgaactcgagcatcagctgaccgactccggt
gccgaagcgattatcatcctggaaaactttgccgccacgctggaaaaagtgatcgccagc
acgcaggtcaagcatgtgatcgtcgccaccatgggtgatttgtttggcggcttgaaaggc
ggcatcgtcaattttgtcgtgcgccatgtgaagaaaatggtgccggcttattcactgcca
caggcagtgccattcaaagaagtcttgcgccaggctgccggcatgaccttgcagcgtccg
gcgctgggccatcaggacctggccttcctgcaatacaccggtggtacgaccggcacggcg
aaaggcgcgatgctcacgcatcgcaatatcattgctaatgtcttgcagaatgaagcatgg
atttcgccagtgctgaataccttgccgaaagataagcaactgatcttcgtctgcgccttg
ccgctgtaccatatcttcgcgttgactacttgcggcatgctgggtacacatctcggtgta
atgaatctgttgattcctaatccgcgtgacatccccggcttcatcaaggaattgatgaaa
tacaaggtgcatttcctgccggccgtgaataccctgtacaacggcttgctcaacaatccc
gattttgccaaggtcgatttctccgaactgaagttgtgcaacggtggcggcatggcggtg
caaaaagtcgtcaacgataaatggcgtgaagtaaccggttgcgcgatttgcgaaggttat
ggcttgtccgaaacgtcgccgacggcgacggccaatccgccgactaccaatgaattcacc
ggcaccatcggtttgccggtttcatcgaccgaactgaagatcatagacagcgacgataat
gaagtaccgcacggcagtgccggtgagattgcgatccgcggtccgcaagtgatggcgggt
tactggaacaatccggtggaaactgcgcaatcgatgacggccgatggtttcttcaagact
ggtgatatcggcatcatggatgagcgtggtttcaccaaaattgtcgatcgcaagaaagac
atgatcctggtttccggtttcaatgtttatccaagcgagatcgaaggtgtggtcgccgcg
catccgggtgtgctggaatgtgcatgcataggtgtgccggatgaacataccggtgaagcg
gtcaagttattcgtggtacgacgcgatcctgcactgaccgaggctgaactgatggcgtat
tgccgtgagcaattcaccggttacaaaaaaccgaagtcaatcgagttccgcaccgaattg
ccgaagtcgaacgtaggcaagatattgcggcgcgaattgcgcgatgaaaagaaaccggcc
tga
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