Janthinobacterium sp. Marseille: mma_0323
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Entry
mma_0323 CDS
T00561
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mms
Janthinobacterium sp. Marseille
Pathway
mms03030
DNA replication
mms03410
Base excision repair
mms03420
Nucleotide excision repair
mms03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
mma_0323 (polA)
03410 Base excision repair
mma_0323 (polA)
03420 Nucleotide excision repair
mma_0323 (polA)
03440 Homologous recombination
mma_0323 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mms03032
]
mma_0323 (polA)
03400 DNA repair and recombination proteins [BR:
mms03400
]
mma_0323 (polA)
Enzymes [BR:
mms01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
mma_0323 (polA)
DNA replication proteins [BR:
mms03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
mma_0323 (polA)
DNA repair and recombination proteins [BR:
mms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
mma_0323 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
mma_0323 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
ABR88976
UniProt:
A6SUR6
LinkDB
All DBs
Position
362071..364809
Genome browser
AA seq
912 aa
AA seq
DB search
MLVDGSSYLYRAFHAMPDLRGPNGAPTGAIYGMINMLRRLRKDYPDAEYMACVFDAKGKT
FRDDLYAEYKAQRASMPDDLVKQIEPIHEAVRAMGWPILMVEGIEADDVIGTLAVEAVKH
GMDTVISTGDKDLAQLVNDRVMLINTMSNEKLDRDGVIAKFGVPPERIIDYLTLIGDTVD
NVPGVDKVGPKTAVKWLTQYGTLDGIVEHAADIKGAVGDNLRRALDWLPQAKTLITVKTD
CDLSGHMDTIVESLTQRPEDKDAMIDFFTRNGFKTWLRELSDKPEAADAAAAPAADAAPQ
GALFADDAPEVEKHYETILTEAELERWLQKIDSAVLTSIDTETTSLIPMQAQLVGISLCC
EPGVAAYIPVAHHYQDVPQQLSRELVLEKMKPWLEDASKAKVGQNLKYDSHIFANHGVNL
RGIVHDTLLESYVFESHRSHDMDSLALRHLNRKTITFQEVCGKGASQIGFEQVEIGRATE
YAAEDADITLQLHQRMWPNVAEDNGLTFVYEKIELPTAVVLQKIERNGVLIDPDLLAKQS
NELGKRMLEIEQNAYELAEQPFNLNSPKQIGEIFFEKLKLPVVKKTPSGSPSTDEEVLQK
LAEDYPLPKVLLEYRGLSKLKSTYTDKLPKMIDPTTGRVHTNYAQAVAVTGRLASNDPNL
QNIPIRNAEGRRIREAFIAAPGNVIVSADYSQIELRIMAHISGDENMLQAFADGEDIHRA
TAAEIFGVERRAVDSEQRRYAKVINFGLIYGMSAFGLAGNLGIERSAAQSYIERYFHRFA
GVKRYMDETRLEAKARGYVQTVFGRRLWLPEINSPNGPRRQGAERAAINAPMQGTAADLI
KLAMIAVQGWLETEKLQSKMIMQVHDELVLEVPETELPLVREKLPELMRHVAQLKVPLIA
EVGVGNNWDKAH
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
ttgttagttgatggttccagctatttgtaccgcgctttccacgcgatgcctgatttgcgc
ggcccgaatggcgcgcctaccggcgccatctacggcatgatcaatatgctgcgccgcttg
cgcaaggactatcccgatgcggaatacatggcctgcgtattcgatgccaagggcaaaacc
ttccgtgacgatttatatgccgagtacaaggcgcagcgtgcgtccatgccggacgacctg
gtgaaacagatcgaacccatccatgaagcggtacgtgcgatgggctggcccatcctgatg
gtggaggggatagaagcggatgacgttatcggtacgctggcggtagaggccgtcaagcac
gggatggataccgtgatctcgaccggcgacaaggatctggcacaactggtgaatgatcgc
gtcatgctgatcaatacgatgagcaatgaaaagctggaccgtgacggcgtaatcgccaaa
tttggcgtgccgccggaacgcatcatcgattacctgacgctgattggcgataccgtcgat
aacgtcccgggtgtggacaaagtcggaccaaaaaccgcagtcaaatggttgacccagtat
ggcacgctggacggcatcgtcgagcacgcagccgacatcaagggtgcggtcggcgataac
ctgcgtcgcgcactggattggttgccacaagccaaaacactgatcacggtgaaaacggat
tgcgacttgtccggacatatggacacgattgtcgaatcgctgacgcaacgtccggaagat
aaggacgcgatgatcgatttcttcacgcgtaacggtttcaagacctggttgcgtgaattg
tcagataaaccggaagcggcagatgctgccgctgcacctgctgcagatgcagcaccgcaa
ggtgctttgttcgctgacgatgcaccggaagtcgaaaagcattatgaaacgatcttgacg
gaagctgagctggagcgctggttgcagaaaatcgatagcgcggtactgacttctatcgat
accgaaaccacttcgctgatcccgatgcaggcacaactggtaggtatttcactctgttgc
gaaccgggcgttgctgcgtatattccagtcgcacatcattaccaggacgtaccgcagcaa
ttatcgcgtgagctcgtattggaaaaaatgaagccatggctggaagatgcgagtaaggcc
aaggttggacaaaacctgaaatacgatagccatatctttgccaatcacggcgtcaatctg
cgcggcatcgtgcacgacaccctgctcgaatcctacgtctttgaatcgcaccgcagtcac
gatatggatagcctggccctgcgccatttgaatcgcaagacgattaccttccaggaggtt
tgcggcaagggcgcatcgcaaatcggtttcgagcaggtcgagatcggtcgtgccaccgaa
tacgcggctgaagatgcagacattacgctgcaactgcatcaacgcatgtggccgaatgtg
gcggaagataatggcctgacttttgtctatgaaaagatcgagttgccgactgcggtagta
ctgcaaaagatagagcgtaatggtgtattgatcgatcccgatttattggccaagcaatcg
aatgaactcggcaagcgcatgctggagatcgaacagaatgcctacgaactggctgagcag
cctttcaatttgaattcaccgaaacaaataggcgaaatcttttttgaaaagttgaagctg
ccggtcgtcaagaaaacgccatcgggttcgccatccaccgatgaagaagtactgcaaaaa
ctggctgaggattatccactgccgaaagtcttgctcgaatatcgtggtttgtcgaaactg
aaatcgacctataccgataaattgccgaagatgatagatccgactaccggccgcgtgcat
accaattatgcgcaagcggtggcggtgaccggtcgcctggcatcgaacgatcccaacctg
caaaacatccctatccgcaatgcagaaggccggcgtatacgcgaagcctttattgccgcg
ccggggaatgtcattgtctctgccgattattcgcaaatcgagttgcgcatcatggcgcat
atttccggtgacgaaaatatgctgcaagcctttgccgacggcgaggatatccatcgtgca
acggcggcagaaatttttggcgtcgagcgcagggcggttgacagtgagcaacgtcgttat
gcgaaggtgattaacttcggccttatctatggcatgagtgctttcggcctggccggcaac
ctcggtatagaacgctcggccgcacaaagctatatcgagcggtacttccatcgtttcgcc
ggcgtgaagcgctatatggatgaaacccgtctcgaagccaaggcgcgtggctatgtgcaa
actgtttttggccgtcgcctgtggctgccggaaatcaattcgcctaacggtccgcgtcgc
cagggtgccgaacgggcggcgatcaacgcgcctatgcagggtactgcggctgacctgatc
aagctggcgatgatcgcggtgcagggctggctggagacagaaaagctgcagtcgaaaatg
atcatgcaggtacacgatgaattggtgctggaagtgccggaaaccgagttgccgctggtc
cgtgagaaactgccggaactgatgcgtcatgtcgcgcaactgaaagtgcctttgatcgcc
gaagtgggcgtcggcaataactgggataaagcgcactaa
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