Janthinobacterium sp. Marseille: mma_0388
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Entry
mma_0388 CDS
T00561
Name
(GenBank) transcriptional regulator, LysR family
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
mms
Janthinobacterium sp. Marseille
Brite
KEGG Orthology (KO) [BR:
mms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mms03000
]
mma_0388
Transcription factors [BR:
mms03000
]
Prokaryotic type
Helix-turn-helix
LysR family
mma_0388
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HTH_24
HTH_5
HTH_20
MarR
HTH_AsnC-type
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ABR89975
UniProt:
A6SUY1
LinkDB
All DBs
Position
complement(428430..429410)
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AA seq
326 aa
AA seq
DB search
MKNATLRQLKVFETVARHLSFSRAAEELHLTQPAVSTQVKKLEEHAGLALFEQLGKKIYL
TPGGSELLHYSRTIIQQFQEAEDAMTQFKGITGGKLNVAVISAGDYFFPRLLVEFARSHQ
GVTLNLSVHNREGLLNQMTSNLTDIAIMVRPPTDMDTINEAFAPHPYVIVAAPDHPLVSQ
KNIPMSRLMQEPFVVREKGSDTWHSMEDGFGDRINDINVAMEIRSTETIKQAVIAGMGVS
FLSAHTISLELQAGSLAVLDVEGFPVMLNWYIVHRKNKRLPPVAQAFKNFLLDEGPELIE
RLIRYNPKPGKQLSNLPAKTTGKNKK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacgcaacactccggcaattgaaggtttttgagacggtcgcccgccatctaagc
ttttcgcgggctgcggaagaattgcacctgactcaaccagcggtttccacccaggtcaaa
aagcttgaggaacacgccggcctcgccctgttcgaacaattagggaaaaaaatctacctg
acgcccggcggctccgaattattgcactacagccgcaccatcatccagcagttccaggaa
gcggaagatgcgatgacccagttcaagggcatcaccggcggcaagctgaacgtagccgta
atcagcgccggcgattacttcttcccgcgcctgctggtggaatttgcgcgcagccaccag
ggcgtgaccctgaacctgtcggtacataaccgcgaaggcttgctgaaccagatgaccagc
aatctgaccgacattgcgattatggtgcggccgccgaccgatatggatacgatcaacgaa
gcgtttgcaccgcatccctacgtgatcgtggcagcacccgatcatccattggtatcgcag
aaaaacattccaatgagcaggctgatgcaggagccctttgtcgtgcgtgaaaaaggctcg
gatacctggcattcgatggaagacggcttcggcgatcgcatcaacgatatcaacgtcgca
atggaaatccgcagtaccgagaccatcaaacaggcagtgatcgccggcatgggtgtgagc
ttcctgtcggcccacaccatcagcctggaactgcaggccggcagcctggccgtgctggat
gtcgaaggtttcccggtcatgctgaactggtacatcgtgcaccggaaaaacaaacgcctg
ccgcctgtcgcgcaagcgtttaaaaacttcctgctggatgaaggtcctgaactgattgaa
cgcctgattcgctacaacccgaaaccaggcaagcaattaagcaatctgccagcgaaaacg
acaggcaagaacaaaaaataa
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