Janthinobacterium sp. Marseille: mma_1048
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Entry
mma_1048 CDS
T00561
Name
(GenBank) transcriptional regulator, AraC family
KO
K25495
AraC family transcriptional regulator, regulator of nimT
Organism
mms
Janthinobacterium sp. Marseille
Brite
KEGG Orthology (KO) [BR:
mms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mms03000
]
mma_1048
Transcription factors [BR:
mms03000
]
Prokaryotic type
Helix-turn-helix
AraC family
mma_1048
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Cupin_2
AAA_SpoVK_2nd
AraC_binding_2
Motif
Other DBs
NCBI-ProteinID:
ABR89134
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Position
1182208..1182987
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AA seq
259 aa
AA seq
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MVTLLGSIDYNADRLFQPAVALRIDTEGSESESPIHMHRKGQLVVALHGGVTCEVPGGLW
MVPPQCGVWIPGGMPHSNRATANARLCFLFVEPGAASLPGECATLALTPLIREMILHLAD
LPQHYPPDGHTAKLVEVLLSELVMMPTEQLHLPVSDHARLRQIASALTQHPDDRSTVAEW
GERFAMSERTLARLVLNETGMTFGRWRRQLHLIIALQRLASGASVQRVSEDLGYDSVSAF
ITMFKKALGKSPARYFSDK
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggtcactctgctgggttcgattgattacaacgccgaccggctttttcagccggccgtt
gccttgcgtatcgataccgagggatcggaaagcgagtcacctatccatatgcaccgcaag
gggcaattggtagtggccttgcatggcggtgtgacttgcgaagtgccgggtggtttgtgg
atggtgccgccgcaatgcggggtctggattccgggtggcatgccgcatagcaatcgggcg
accgccaatgcgcgcctgtgtttcctgtttgtggagccgggtgccgccagtctgcccggc
gaatgtgcgacgctggcgctgacgcccttgatccgcgagatgattttgcacctcgcggat
ttgccgcagcactatccaccggatgggcatacagcaaagctggttgaagtattgctgagt
gagttggtgatgatgccgaccgaacaattgcatttgccggtatccgaccatgcgcgcctg
cgccagattgccagcgcgttgacccagcatccggatgaccgcagcacggttgcagagtgg
ggcgagcgcttcgcgatgagtgaacgtaccctggcgcggctggtactgaatgaaaccggc
atgaccttcggccgctggcggcgccagttacacctgataatcgccttgcaacgcctggct
tccggtgcatcggtgcaaagggtatcggaagacctcggctatgactcggtcagcgcattc
attacgatgttcaagaaagccctgggcaaatcaccggcacgctatttttctgacaaataa
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