Janthinobacterium sp. Marseille: mma_1233
Help
Entry
mma_1233 CDS
T00561
Symbol
fecI4
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
mms
Janthinobacterium sp. Marseille
Pathway
mms02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mms00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
mma_1233 (fecI4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mms03021
]
mma_1233 (fecI4)
Transcription machinery [BR:
mms03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
mma_1233 (fecI4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
PhyR_sigma-like
Sigma70_ECF
HTH_23
HTH_Mga
HTH_11
HTH_28
GerE
Motif
Other DBs
NCBI-ProteinID:
ABR90305
LinkDB
All DBs
Position
1399469..1400041
Genome browser
AA seq
190 aa
AA seq
DB search
MRIVLININPHRIPMSSFEPALQQQMHTLYSNHHGWLHGWLRKKLGCAFQAEDLAHDTFL
RLIVRPRQLDSAYDPRAYLTKIAQGLVVDLWRRQEIERAWLATLAAHPESVVPSAEHQAI
IIETLIEVDRLLAQLPEKPRRALLLAHLHDMTYAEIAQVLDVSERMVKKYMAQAMLHCLL
NGAAFKEAMA
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgagaatagttctcattaacatcaacccgcaccgaatccccatgtcttcctttgaaccg
gctttgcaacagcaaatgcatacgctttacagcaatcatcacggctggttgcatggctgg
ttgcgcaagaagctcggttgcgccttccaggcggaagatctggcacatgacaccttcctg
cgcctgatcgtcaggccgcggcaactcgatagcgcttacgatccgcgcgcctacctgacc
aagattgcgcaaggcctggtcgtcgatttatggcgtcgtcaggaaatcgaacgtgcgtgg
ctggcgacattggctgcgcatcctgaatccgtggtgccatcggccgaacatcaggccatc
atcatcgaaaccctgatcgaagtcgatcgcctgcttgcgcaattgccggaaaagccgcgg
cgggcattattgctggcgcatctgcacgacatgacgtatgccgagatcgcccaggtcctg
gacgtatccgaacgcatggtcaaaaaatatatggcgcaagcgatgctgcattgcctgctc
aatggtgcggcattcaaagaggctatggcttga
DBGET
integrated database retrieval system
