Janthinobacterium sp. Marseille: mma_1514
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Entry
mma_1514 CDS
T00561
Symbol
pdhD1
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
mms
Janthinobacterium sp. Marseille
Pathway
mms00010
Glycolysis / Gluconeogenesis
mms00020
Citrate cycle (TCA cycle)
mms00260
Glycine, serine and threonine metabolism
mms00280
Valine, leucine and isoleucine degradation
mms00310
Lysine degradation
mms00380
Tryptophan metabolism
mms00620
Pyruvate metabolism
mms00630
Glyoxylate and dicarboxylate metabolism
mms00640
Propanoate metabolism
mms00670
One carbon pool by folate
mms00785
Lipoic acid metabolism
mms01100
Metabolic pathways
mms01110
Biosynthesis of secondary metabolites
mms01120
Microbial metabolism in diverse environments
mms01200
Carbon metabolism
mms01210
2-Oxocarboxylic acid metabolism
mms01240
Biosynthesis of cofactors
Module
mms_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mms_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mms_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
mms00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
mma_1514 (pdhD1)
00020 Citrate cycle (TCA cycle)
mma_1514 (pdhD1)
00620 Pyruvate metabolism
mma_1514 (pdhD1)
00630 Glyoxylate and dicarboxylate metabolism
mma_1514 (pdhD1)
00640 Propanoate metabolism
mma_1514 (pdhD1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
mma_1514 (pdhD1)
00280 Valine, leucine and isoleucine degradation
mma_1514 (pdhD1)
00310 Lysine degradation
mma_1514 (pdhD1)
00380 Tryptophan metabolism
mma_1514 (pdhD1)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
mma_1514 (pdhD1)
00670 One carbon pool by folate
mma_1514 (pdhD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mms04147
]
mma_1514 (pdhD1)
Enzymes [BR:
mms01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
mma_1514 (pdhD1)
Exosome [BR:
mms04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
mma_1514 (pdhD1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
GIDA
HI0933_like
NAD_binding_8
FAD_oxidored
AlaDh_PNT_C
FAD_binding_2
Pyr_redox_3
FAD_binding_3
UDPG_MGDP_dh_N
3HCDH_N
DAO
2-Hacid_dh_C
NAD_binding_2
Thi4
Lys_Orn_oxgnase
Lycopene_cycl
T6SS_Tse3_cat
Motif
Other DBs
NCBI-ProteinID:
ABR88869
UniProt:
A6SY57
LinkDB
All DBs
Position
1706267..1707694
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AA seq
475 aa
AA seq
DB search
MSKNFDVVVIGAGPGGYVAAIRAAQLGFTVACIDEWKNEKGGPAPGGTCTNVGCIPSKAM
LQSSENYHHAGHAFAEHGIEVKGLSLNVKKMVARKDTVVKQNNDGILYLFKKNKVTFFHG
RGSFVKAADGGHEIKIAGATEENIFAKHVVVATGSNPRALPGAAFDEKLILSNTGALEIT
EVPKRLGVIGAGVIGLEMGSVWRRLGSEVTVLEALPAFLGAVDDAVAKEAFKQFTKQGLA
ISLGVQIGAITAGKNDVTVNYVDDKGAAQKAVFDKLIVSIGRVPNTIGLNAEAVGLKLDE
RGFIAVDADCKTSLPNVWAVGDVVRGPMLAHKSEEEGVAVAERIAGQHGHVNFNTIPWVI
YTSPEIAWVGKTEQQLKAEKIAYKAGSFPFLANGRARALGDTTGFVKFLADAKTDEILGV
HIIGPMASELISEAVVAMEFRASSEDIARICHAHPSLSEAVKEAALAVDGRALNF
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaattttgatgtagtggtaatcggcgccggtcctggcggttatgtggcggcg
atacgtgcagcgcagctgggttttacagtggcttgtatcgatgaatggaagaatgaaaaa
ggcggtccggcacctggcggcacctgtaccaatgtcggttgtatcccatcgaaggcgatg
ttgcagtcgtcggaaaattatcatcacgccggacatgcgtttgccgagcacgggatcgaa
gtcaaaggtttgtcgctgaacgtcaagaagatggtggcacgcaaggataccgtcgtgaag
caaaacaatgacggcatcctgtatctgttcaaaaagaataaagttactttcttccacggt
cgcggttctttcgtgaaagccgctgacggcggtcatgaaatcaagatcgcaggtgccacc
gaagaaaacatttttgccaagcacgtggtggtcgctaccggttcgaatccgcgtgcattg
ccgggtgctgcattcgatgaaaaactgatcctgtcgaataccggtgcactggagatcact
gaggtgcctaagcgtctgggtgtgatcggcgccggcgtgatcggtctcgagatgggcagc
gtctggcgtcgcctcggttccgaagtgacagtgctggaagcattgccggctttcctcggc
gcagttgatgatgcagtcgcgaaagaagcgttcaagcaattcaccaagcaaggcctggcg
atcagcctcggcgtgcaaatcggtgcgattactgcaggcaagaatgacgtcaccgtcaat
tacgttgacgacaagggcgctgcgcaaaaagcggtgttcgacaagttgatcgtttcgatc
ggccgcgtgccaaacaccattggcttgaacgctgaagcggttggcctgaagctggatgag
cgcggtttcatcgcggttgatgctgattgcaaaaccagcttgccgaatgtctgggcggtt
ggcgacgtagtacgcggaccaatgctggcacacaaatcggaagaggagggagtggcagtg
gcggagcgtatcgccggtcaacacggtcatgtcaatttcaacacgatcccgtgggtgatt
tatacttcaccggagatcgcatgggttggcaagaccgaacagcagttgaaagcggaaaag
atcgcgtataaagcaggctctttccctttccttgccaacggtcgcgcgcgtgccttgggt
gataccaccggtttcgtgaaattccttgcggatgcgaaaaccgatgaaatcctcggcgtg
cacatcattgggccgatggcttcggaactgatttcggaagctgtggtcgcaatggagttc
cgtgcatcttccgaagatatcgcacgcatctgtcatgcacatccatcattgtcggaagct
gtcaaagaggcggcactggcagttgatggccgagccctgaatttctaa
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