Janthinobacterium sp. Marseille: mma_1534
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Entry
mma_1534 CDS
T00561
Symbol
hupB
Name
(GenBank) DNA-binding protein Hu-beta (bacterial histone-like DNA-binding protein)
KO
K03530
DNA-binding protein HU-beta
Organism
mms
Janthinobacterium sp. Marseille
Brite
KEGG Orthology (KO) [BR:
mms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mms03032
]
mma_1534 (hupB)
03036 Chromosome and associated proteins [BR:
mms03036
]
mma_1534 (hupB)
03400 DNA repair and recombination proteins [BR:
mms03400
]
mma_1534 (hupB)
DNA replication proteins [BR:
mms03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
mma_1534 (hupB)
Chromosome and associated proteins [BR:
mms03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
mma_1534 (hupB)
DNA repair and recombination proteins [BR:
mms03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
mma_1534 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
ABR91730
UniProt:
A6SY77
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All DBs
Position
1728233..1728505
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELIDHIAGSADISKAAAARALDSVIGAVKTTLKKNGSVTLVGFGTFSVGKRAARTG
RNPRTGEAIKIKAAKVPKFKPGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaaaccgaattgattgaccacattgctggttccgccgatatttccaaagctgcc
gcagcacgcgcgcttgattcagtgatcggtgcagtcaaaaccacattgaagaaaaatggc
tccgtaaccctggttggtttcggtacattttccgtaggaaaacgtgcagcacgcaccggc
agaaacccacgtactggcgaagcgatcaaaatcaaagcagctaaagtgcctaaatttaaa
ccaggcaaagcattgaaagacgcagttaactag
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