Janthinobacterium sp. Marseille: mma_2022
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Entry
mma_2022 CDS
T00561
Symbol
fecI6
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
mms
Janthinobacterium sp. Marseille
Pathway
mms02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mms00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
mma_2022 (fecI6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mms03021
]
mma_2022 (fecI6)
Transcription machinery [BR:
mms03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
mma_2022 (fecI6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_24
HTH_23
HTH_38
HTH_11
Sigma70_ECF
Trp_repressor
HTH_17
HTH_Tnp_4
HTH_Tnp_ISL3
Rv2175c_wHTH
HTH_28
TetR_N
LacI
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
ABR90393
LinkDB
All DBs
Position
2281516..2282052
Genome browser
AA seq
178 aa
AA seq
DB search
MQDISAIPGNPVNHLLPSSSVIEKLYAEHQSWLLARLQRRLPSRADAEDVTSETFAQVVE
NKNPADIQEPRAFLTTIAKRVLFHLWRRQDLEKAYLQSLMLMPEASVLSPEERAVLIEAI
EQIDRALDSLPLPVKTAFLYSRLDRLTYPEIALRLGVSVATIERYMKRALLQCLQWAP
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
ttgcaagatatatctgctatccccggtaatcctgtgaaccacctactcccgtcttcttcg
gtcatcgagaaactctatgccgagcatcaatcctggctgcttgcgcgcttgcaacgccgc
ctgcccagccgcgctgatgccgaagacgtgacttcggaaacctttgcacaagtcgtcgaa
aacaagaacccggcagacattcaggagccgcgcgccttcctgacgacgattgccaagcgc
gtgctgtttcacctgtggcgccggcaggatctggaaaaagcctacctgcaatcattgatg
ctgatgccggaagccagcgtgctgtcgccggaagaacgggccgtactgatagaagcgata
gagcaaatagaccgtgcactggactcgctgccgctaccggtcaaaaccgcttttctctat
agccgcctggatcgcctgacttatcccgaaatcgcattgcgcctgggcgtctcggtcgcg
acgatagaacgctatatgaagcgcgccctgctgcaatgcctgcaatgggcaccatga
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integrated database retrieval system
