Janthinobacterium sp. Marseille: mma_2030
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Entry
mma_2030 CDS
T00561
Symbol
fecI8
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
mms
Janthinobacterium sp. Marseille
Pathway
mms02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mms00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
mma_2030 (fecI8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mms03021
]
mma_2030 (fecI8)
Transcription machinery [BR:
mms03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
mma_2030 (fecI8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_28
HTH_24
PhyR_sigma-like
HTH_Tnp_ISL3
Phage_terminase
GerE
Sigma70_r3
TnsD
HTH_VMAP-M9
DUF2774
HTH_11
Rv2175c_wHTH
HTH_20
HTH_5
HTH_3
Motif
Other DBs
NCBI-ProteinID:
ABR90337
LinkDB
All DBs
Position
complement(2293447..2293968)
Genome browser
AA seq
173 aa
AA seq
DB search
MSAPALNPVLQQQAHTLYSDHHGWLFGWLRKKMGCTHQAADLAHDAFLQILGRPEALVDV
REPRAYLTTIARRLVFESWRRRDLEQAYLAELAALPEDVAPSPEDQALVLETLLAIDRLL
DGLSVKARSAFLMSQLDGMTYSEIAAELNVSASRVRQYMAQALSCCYTAALPA
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccccggcccttaacccagtcctgcaacagcaggcccataccctctacagcgac
catcatggttggctgttcggctggttgcgaaaaaagatgggctgtacgcatcaggcggcg
gatcttgcgcacgatgccttcctgcaaatactcgggcgtccggaagcattggtggacgtg
cgcgagccacgcgcttatttaacgacaattgcacgccggctggtattcgaaagctggcgt
cggcgtgacctggagcaggcctatctggccgagctggcagccttgcctgaagacgtggca
ccgtcgccggaagatcaggccctggtactggaaaccttgttggctatcgaccgtttgctg
gacgggttgtcagtcaaggcgcgcagcgcattcctgatgagccagctggatggcatgact
tacagtgaaattgcagccgagctgaatgtctcggcaagtcgtgtgcgtcaatatatggcg
caggcactaagctgctgctataccgctgcattgccggcatga
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integrated database retrieval system
