Janthinobacterium sp. Marseille: mma_2107
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Entry
mma_2107 CDS
T00561
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mms
Janthinobacterium sp. Marseille
Pathway
mms03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
mma_2107 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mms03400
]
mma_2107 (alkA)
Enzymes [BR:
mms01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
mma_2107 (alkA)
DNA repair and recombination proteins [BR:
mms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
mma_2107 (alkA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
DUF1129
Motif
Other DBs
NCBI-ProteinID:
ABR88746
LinkDB
All DBs
Position
complement(2376374..2377021)
Genome browser
AA seq
215 aa
AA seq
DB search
MGKTIATDETRILPAYWEEAKAELMKRDRILRKLIPQFGDLHLVGRGEAFSTLARSIIGQ
QISTKAADSVWQRFLEVCPKCTPAQVIKAGDKLATCGLSKRKAEYIFDLADHFKAKRVNC
DKWAEMEDEEVIAELIQIRGIGRWTAEMFLIFNLLRPNILPLDDLGLLAGISRNYFSGEP
VSRSDAREVAANWEPYRTVATWYLWRSLDPVEAAN
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaacgatcgccactgatgaaacccgtatcctgccagcctactgggaggaggcc
aaggccgagctgatgaagcgcgaccgtatcctgcgcaagctcattccgcagtttggcgat
ttgcacctggttggccgcggtgaagcattttccacattggcacgttccatcataggacaa
caaatttcgactaaagcggccgactccgtctggcagcgcttcctcgaagtttgcccaaaa
tgtacgccggcacaggtgatcaaggctggtgacaagctggcaacttgtggtttatccaag
cgtaaagcggagtatattttcgatctggccgaccatttcaaggcaaaacgtgtcaattgt
gacaagtgggccgagatggaagatgaagaagttatcgctgagttaattcaaattcgcggt
atcggacgctggacagcggagatgtttttgatatttaatctgctccgaccgaatattttg
ccgttggacgaccttggtttgctggcgggcattagccgtaattatttttccggcgagccg
gtttcgcgcagcgatgcgcgggaagtagccgccaactgggagccttaccgtactgttgcg
acctggtatctatggcgtagcctggatccggtagaggcagcaaactag
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