Janthinobacterium sp. Marseille: mma_2588
Help
Entry
mma_2588 CDS
T00561
Symbol
fecI13
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
mms
Janthinobacterium sp. Marseille
Pathway
mms02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mms00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
mma_2588 (fecI13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mms03021
]
mma_2588 (fecI13)
Transcription machinery [BR:
mms03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
mma_2588 (fecI13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_24
PhyR_sigma-like
HTH_23
GerE
MarR
HTH_11
HTH_IclR
HTH_28
TnsD
Motif
Other DBs
NCBI-ProteinID:
ABR90366
LinkDB
All DBs
Position
complement(2920602..2921147)
Genome browser
AA seq
181 aa
AA seq
DB search
MHLVLQSLKRKLMSAADSVQQQQVHLLYTEHHGWLHAWLRKRLGNSFDAADLAHDTFLRV
LTKDVPLAIREPRALLTTIAQGMVANLYRRRQIEQAYLDALAVLPESHAISPEARAIMLE
TLVEIDRLLDGLAPLVRKVFLLSQLDGLGQAEIAERLAISIPTVKRYIAKAVAQCCFTEL
N
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
ttgcatttagtgcttcaatccctgaaaaggaagctcatgtcggctgccgactctgttcaa
cagcaacaagttcatctgctctataccgagcatcatggctggctgcatgcatggttgcgc
aaacgtttgggcaactctttcgatgcagccgatcttgcgcacgatacttttttgcgcgtg
ctgaccaaggatgtgccgctcgcgatccgcgaaccgcgtgccttgctgaccacgattgca
caaggcatggtcgccaacctgtatcgtcggcgccaaatcgaacaggcttacctcgatgca
ttggccgtgctgccggagtcgcatgcgatctcgcccgaagcgcgcgcaatcatgctggag
acattggtcgagattgatcgcctgcttgacggtttggcgccattggtacgcaaggtattt
ttgttgtcgcaactcgacggtttgggccaggccgagattgccgaacggctggcgatttca
attcctacagttaaacgttatatcgccaaggctgtggcgcaatgctgcttcacggagttg
aactga
DBGET
integrated database retrieval system
