Janthinobacterium sp. Marseille: mma_2667
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Entry
mma_2667 CDS
T00561
Symbol
ihfB
Name
(GenBank) integration host factor beta-subunit
KO
K05788
integration host factor subunit beta
Organism
mms
Janthinobacterium sp. Marseille
Brite
KEGG Orthology (KO) [BR:
mms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mms03032
]
mma_2667 (ihfB)
03036 Chromosome and associated proteins [BR:
mms03036
]
mma_2667 (ihfB)
03400 DNA repair and recombination proteins [BR:
mms03400
]
mma_2667 (ihfB)
DNA replication proteins [BR:
mms03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
mma_2667 (ihfB)
Chromosome and associated proteins [BR:
mms03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
mma_2667 (ihfB)
DNA repair and recombination proteins [BR:
mms03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
mma_2667 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
CATASP
DUF2267
Motif
Other DBs
NCBI-ProteinID:
ABR89250
UniProt:
A6T1G0
LinkDB
All DBs
Position
complement(3014555..3014860)
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AA seq
101 aa
AA seq
DB search
MTKSELIARLAERYPQLVAKDADYAVKTILDAMSDALATGQRIEIRGFGSFALNSRPPRI
GRNPKSGDKVMVPEKRVPHFKPGKQLRERVDAMVGQPIIED
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagtcggagctgattgctcgcttggctgagcgttatccgcaactggtagctaag
gatgcggattacgcggtcaaaaccatccttgatgcgatgtccgatgccctggcaaccgga
caacgcatcgagatacgtggtttcggcagctttgcactcaatagccgcccaccgcgtatc
ggtcgcaacccaaagtcgggtgacaaggtgatggttccggaaaaacgggttcctcacttc
aagccaggcaagcagttgcgtgagcgtgtggatgcgatggttgggcaaccaatcatcgaa
gactga
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