Janthinobacterium sp. Marseille: mma_3142
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Entry
mma_3142 CDS
T00561
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
mms
Janthinobacterium sp. Marseille
Brite
KEGG Orthology (KO) [BR:
mms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mms03021
]
mma_3142 (rpoH)
Transcription machinery [BR:
mms03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
mma_3142 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
ABR89246
UniProt:
A6T2T5
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All DBs
Position
3513816..3514712
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AA seq
298 aa
AA seq
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MKAVSASTALVPNSNMLALGFSGALGNIDAYISAVNRLPMLTHEEEMSLARRLRDENDLG
AAQKLVLSHLRLVVSIARGYLGYGLPHADLIQEGNIGLMKAVKRFDPDQGVRLVSYSMHW
IKAEMHEYILKNWRLVKVATTKAQRKLFFNLRSHKTGLDSMTPDQVDELAKTLNVKREEV
IEMETRLSGRDIALEAPTDDEDDKFAPIAYLSSDMQEPTKVLESQQFDRLQTEGLSNALG
KLDARSRRIVEARWLANDDGSGATLHELADEFGVSAERIRQIEAVALKKMKGSLAAYA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcagtatctgcatctaccgcattggttcctaacagcaatatgctggcattggga
ttttctggtgcgctgggcaatattgacgcttacatctcggcggtcaatcgcctccctatg
ctgacgcacgaagaagaaatgtctttggcgcgtcgcctgcgcgacgagaatgatctcggt
gccgcgcaaaaactggtgctctcgcatctgcgcctggtcgtctcgatcgcccgcggctat
ctgggctacggcctgccgcacgcagacttgatccaagaaggcaatatcggcttgatgaaa
gccgtgaagcgtttcgacccggatcagggcgtgcgcctggtttcgtattcgatgcattgg
atcaaggcagaaatgcatgagtacatcctgaaaaactggcgtctggtgaaagtcgcgacg
accaaagcgcaacgcaaattgttcttcaatctgcgcagccacaaaactggcctggattcg
atgaccccggatcaggtcgacgagctggcgaaaacgctgaacgtcaaacgggaagaagtc
attgagatggaaacccgcttgtccggtcgcgatatcgcactggaagcgccgaccgacgat
gaagacgacaagtttgcgcctatcgcttacctgtcttccgatatgcaggaaccgaccaag
gtgctggaatcgcagcagtttgatcgcctgcaaaccgaaggcttgtcgaatgccttgggc
aaactggatgcacgttcgcgtcgcatcgttgaagcgcgctggttggcgaacgacgatggc
tccggtgcaaccttgcatgaattggctgatgagttcggcgtatcggccgaacgtattcgc
cagatcgaagcagtcgcactgaagaaaatgaaaggctcgctggccgcctacgcttaa
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