Janthinobacterium sp. Marseille: mma_3341
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Entry
mma_3341 CDS
T00561
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
mms
Janthinobacterium sp. Marseille
Pathway
mms03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
mma_3341 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mms03400
]
mma_3341 (uvrA)
DNA repair and recombination proteins [BR:
mms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
mma_3341 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
mma_3341 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_21
AAA_29
AAA_23
nSTAND1
DnaJ_CXXCXGXG
RsgA_GTPase
nSTAND3
AAA_25
NACHT
cobW
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ABR89433
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Position
3716343..3719207
Genome browser
AA seq
954 aa
AA seq
DB search
MDEIRIRGARTHNLKNINLDLPRNKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARVGTPYC
PDHPENPLAAQSVSQMVDAVLAMPEDTKLMIMAPVVANRKGEHVDLFEQMQAQGFVRFRV
QSGTNNAHIYDVDALPKLKKAEKHTIDVVIDRIKVKADIKQRLAESFETALRLAEGRALV
LEMDSGVEHLYSNKFACPVCGYSLQELEPRLFSFNNPMGACPECDGLGHIEFFDPKRIVA
FPNLSLASGAVKGWDRRNQFYFQMLSNLAEYYDFDIDMPFEKLPEAAQQAVLFGSGKQNI
PFTYVNEKGRTVIREHTFEGVVNNLQRRYRETDSMAVKEELAKFINEKECPSCQGARLRV
EARNVMVGNGKQKRAIFEVAATPLRQTLEFFETLVLTGAKKEIADRIIKEIVSRLKFLNN
VGLDYLSLERSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLIETLK
HLRDIGNSVLVVEHDEDAIRCADYVVDMGIGAGVHGGEVIAEGTLKDILKSKKSLTAQYL
NGTLGIAVPKKRTPPNPKKQFVITGATGNNLKNVTLELPVGLLTCVTGVSGSGKSTLVND
TLYHAASRHLYGSQAEPAPHDSISGFEHFDKVISVDQAPIGRTPRSNPATYTGLFTPIRD
LFATVPTSKERGYSAGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCHGNRYNR
ETLEIQYKGKNITEVLGMTVEEAHVFFKPVPVIARKLQTLLDVGLGYIRLGQSATTLSGG
EAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIDLLLKVIHRLRDQGNTVVIIEHNLD
VIKTADWLVDMGPEGGAGGGQVIGAGTPEDLAKNPASFTGKYLAPLLKQKKSAA
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggacgagattcgtatccgaggtgcgcgtacgcacaacctcaagaacatcaatctggat
ttgccacgcaataagctgatcgtgatcaccggcctgtccggctccggcaagtcgtcgctc
gccttcgatacgctgtatgcagaaggccagcgtcgttacgtcgaatcgctgtcggcttac
gcacgccagtttttacagctgatggagaagccggacgtcgacctgatcgaaggcttgtcg
cccgccatctcgatcgagcaaaaagcgacttcgcataatccgcgttccaccgtcggcacc
gtcaccgaaatccatgattacctgcgcctgctgtatgcccgcgtaggtacaccctattgc
cccgaccatccggagaatccgctggctgcgcaatcagtatcgcaaatggtcgatgccgtg
ctggccatgccggaagataccaagctgatgatcatggcgccggtggtagcgaaccgcaaa
ggcgaacacgtcgatctgttcgaacagatgcaggcgcaaggcttcgtgcgtttccgcgtg
cagagcggcaccaataatgcgcacatctatgatgtcgacgctttgccgaaactgaagaaa
gcggaaaaacacacgattgacgtcgtgattgaccgcatcaaggtaaaagccgatatcaag
caacgcctcgcagaaagctttgaaacggcgctgcgcctggccgaaggccgtgcgctggta
ttggaaatggatagcggcgtcgaacatttgtattcgaacaaattcgcctgcccggtttgc
ggctattcgctgcaggaactggaaccgcgcctgttctctttcaataacccgatgggcgct
tgcccggaatgcgacggtctcggtcatatcgagttcttcgatccgaagcgcattgtcgcc
ttccctaacctttcactcgccagcggcgcggtcaaaggctgggaccgacgcaatcagttt
tacttccagatgctgtcgaacctggcggagtactacgacttcgacatcgacatgccattc
gaaaagctgccggaagccgcgcagcaagcggtactgttcggctccggcaagcaaaacatt
ccattcacctatgtgaatgaaaaaggccgtaccgtcatccgcgaacacaccttcgaaggc
gtggtcaacaatctgcaacgtcgttatcgtgaaaccgattcgatggcagtgaaggaagaa
ctggccaagttcatcaatgaaaaagaatgcccaagctgccagggtgcgcgcctgcgcgtc
gaggcacggaacgtgatggtcggcaacggcaagcaaaagcgggcgatttttgaagtcgcg
gcaacacctttgcgccagaccctggaattctttgaaaccctggtgctgaccggtgcaaag
aaagaaatcgccgaccgcatcatcaaggaaatcgtctcgcgcctgaaattcctcaacaac
gtcggcctcgactatctgtcgctggaacgcagcgcggataccttgtccggcggcgaggca
cagcgtatccgccttgcctcgcaaatcggttccggcctgaccggtgtcatgtatgtattg
gatgaaccatcgatcggtttgcatcagcgcgacaacgacaggctgatcgaaaccctcaag
catttgcgcgacatcggcaatagcgtgctggtggttgagcatgatgaagatgcgatccgc
tgtgccgactatgtggtcgatatgggcataggtgcaggcgtacacggcggtgaagtgatt
gccgaagggacgttgaaagacatcctgaaaagcaagaagtcactgaccgcgcaatacctg
aacggcacacttggaattgccgtgccgaagaaacgcacgccgccgaatccgaagaaacaa
ttcgtgattaccggcgccaccggcaacaacctgaaaaacgtcacactggaattaccggtc
ggcttgctgacttgcgtgaccggtgtgtcaggctcgggcaagtcaacactggtcaacgat
acgctgtaccacgcagcttcgcgccacctgtatggttcgcaggcagaaccggcaccgcat
gattcgatcagcggcttcgagcatttcgacaaggtcatctcggtcgaccaggcacctatc
ggccgcacaccgcgctcgaatccggctacctataccggcttgttcacaccgatacgcgat
ctgtttgccacggtaccgacatcgaaggaacgcggttattcagcaggacgcttctccttc
aacgtcaagggcggacgctgcgaagcctgccagggcgatggcgtgatcaaggttgagatg
cacttcctgccggacgtctacgttccttgcgacgtttgccatggcaatcgctacaaccgc
gaaactttggaaatccagtacaagggcaagaacatcaccgaagtactgggtatgacggta
gaagaagcgcatgtcttcttcaaaccggttcctgtcatcgcgcgcaaactgcaaaccttg
ctggatgtgggcctcggttatatccgcctcggccaaagtgcaaccacgctgtccggcggt
gaagcgcaacgcgtcaaactgtcgctggaattgtcgaaacgcgataccggccgcaccctg
tacatcctggatgagccgactaccggcctgcacttccacgatatcgatttgttgctgaaa
gtcatacacaggctgcgcgaccagggcaataccgtcgtcatcattgaacacaatctggac
gtgatcaagacagccgactggctggtcgatatgggccctgaaggcggcgccggcggtggt
caggtaattggagccggtacgccggaagacctggcgaagaatcctgccagctttaccggc
aagtatctggctccactgctcaagcaaaagaaatcggctgcttaa
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