Janthinobacterium sp. Marseille: mma_3485
Help
Entry
mma_3485 CDS
T00561
Symbol
fecI14
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
mms
Janthinobacterium sp. Marseille
Pathway
mms02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mms00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
mma_3485 (fecI14)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mms03021
]
mma_3485 (fecI14)
Transcription machinery [BR:
mms03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
mma_3485 (fecI14)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
GerE
TnsD
HTH_7
DUF722
DUF8073_M
Trp_repressor
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
ABR88884
LinkDB
All DBs
Position
complement(3875796..3876302)
Genome browser
AA seq
168 aa
AA seq
DB search
MPTPEHTMHQEVATLYGDHHGWLQGWLCKKLGNAFDAADLAQDTFIRILGSRDLSAIQEP
RAYLTTVAKGLVINWYQRQALERAYLEALALLPEPQAPSAEQRYIILETLYEIDAMLDAL
QARVKRVFLLSQIEGMKYEEIAVQMDVSVITVKRYMKQAFLHCLEFHG
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgcctacgccagaacacaccatgcaccaggaagttgcaacgctatacggcgaccatcac
ggatggttgcagggatggctatgcaaaaagctgggcaatgcatttgatgcggcagacctg
gcgcaggatacttttatccgcatcctcggctcgcgtgatctctcggcgatacaggaacca
cgcgcctatctgacgacggtagccaagggcctggtgattaactggtatcagcgccaggca
ctcgaacgtgcctatctggaggcgctggcattgttgccggagccgcaagcgccttccgcc
gaacagcgctacatcatcctcgagaccctgtatgaaatcgacgcgatgcttgatgccttg
caagccagggtcaaacgcgtcttcctgctgtcgcagattgaaggcatgaagtacgaagaa
atcgcggtgcaaatggatgtctctgtcatcactgtgaaacgctatatgaagcaggccttc
ctgcactgtctggaattccatggctga
DBGET
integrated database retrieval system
