Janthinobacterium sp. Marseille: mma_3493
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Entry
mma_3493 CDS
T00561
Symbol
fecI15
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
mms
Janthinobacterium sp. Marseille
Pathway
mms02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mms00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
mma_3493 (fecI15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mms03021
]
mma_3493 (fecI15)
Transcription machinery [BR:
mms03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
mma_3493 (fecI15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_24
HTH_Tnp_ISL3
GerE
HTH_23
HTH_11
HTH_7
TnsD
HTH_40
HTH_38
HTH_28
HTH_29
Motif
Other DBs
NCBI-ProteinID:
ABR90368
LinkDB
All DBs
Position
complement(3887531..3888043)
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AA seq
170 aa
AA seq
DB search
MSFNETALRQEISTLYSDHHGWLQGWLRKKLGDAGKAADLAHDTFVRLLAREELIAAREP
RAFLTTVAQRVLFSHWRREELERAYLNALAQLPEAFAPSPEDRAILLESLVEIDRMLDGL
PIPVKRAFLYAQLDDMSHAEIAAELNISITTVKRYLIRAGVQCYFALEQA
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcaacgaaaccgcactccgtcaggaaatctcgactttgtacagcgaccatcac
ggctggttgcagggctggttgcgcaagaagctgggagacgccggcaaggcggcggacctg
gcgcatgacacttttgtgcgcctgctggccagggaagaattgattgcagcgcgtgaaccg
cgcgccttcctgactacggtggcgcagcgtgtgctgttcagtcactggcgccgcgaagag
ctggaacgtgcttacctaaatgcactggcgcagctgccggaagcgtttgctccttcgccg
gaagaccgggccatcctgctggaaagcctggtcgagattgatcgcatgctcgatggtttg
ccgatcccggtcaaacgcgccttcctctatgcgcagctcgatgatatgagccatgcggag
attgccgccgaactgaatatttccatcactaccgtcaaacgctacctgatacgcgccggc
gtgcagtgctactttgcgctggagcaggcatga
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