Janthinobacterium sp. Marseille: mma_3497
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Entry
mma_3497 CDS
T00561
Symbol
fecI16
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
mms
Janthinobacterium sp. Marseille
Pathway
mms02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mms00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
mma_3497 (fecI16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mms03021
]
mma_3497 (fecI16)
Transcription machinery [BR:
mms03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
mma_3497 (fecI16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HVO_A0261_N
PhyR_sigma-like
HTH_11
GerE
HTH_24
Xre-like-HTH
HTH_28
HTH_38
TnsD
DUF8073_M
DUF722
Motif
Other DBs
NCBI-ProteinID:
ABR90308
LinkDB
All DBs
Position
complement(3892670..3893224)
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AA seq
184 aa
AA seq
DB search
MRIVLICIDAIVAMSVSESILQQQIHTLYSNHHGWLFGWLRKKLGCAHNAADIAQDTFLR
ILTAQDKRSDLDLREPRAYLTTVAGRVLLNHYRRLSLERAYLEALALVPDMYAPAPEDRL
IILETLHEIDAMLDALPHKARTAFLLAQFEGLSYAEISVRLDVSVRTVKRYMAQAFEECI
MLDL
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgagaatagttctcatttgcattgatgccattgtcgcaatgtccgtctccgaatccatt
ctgcagcagcaaatccatacgctatacagcaaccaccacggttggctgttcggctggctg
cgcaaaaaacttggttgcgcgcataacgcggcggacatcgctcaagatacattcctgcgc
atcctgacggcgcaagacaagcgcagcgacctggatttaagggagccgcgggcttacctg
acgacggttgccgggcgcgtgctgctgaatcactatcgccgcctgtcgctggaacgtgcc
tacctggaagcgctggcactggtgccggatatgtatgcaccggcacccgaagaccggctc
atcattctggaaaccttgcatgaaatcgacgcgatgctggatgccttgccgcacaaggcg
cgcaccgctttcctgctcgcacagtttgaaggcttgagttacgccgaaatcagcgtgcgc
ctggatgtcagcgtgcgtaccgtcaaacgttatatggcgcaggcctttgaagaatgcatc
atgctggatctctga
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