Janthinobacterium sp. Marseille: mma_3606
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Entry
mma_3606 CDS
T00561
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
mms
Janthinobacterium sp. Marseille
Pathway
mms03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
mma_3606 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mms03400
]
mma_3606 (priA)
Enzymes [BR:
mms01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
mma_3606 (priA)
DNA repair and recombination proteins [BR:
mms03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
mma_3606 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
AAA_19
DUF7511
HypA
Zn_ribbon_6
ADDB_N
TetR_C_31
Bac_DnaA
AAA_11
AAA_16
zf-CHY
zf-IS66
Motif
Other DBs
NCBI-ProteinID:
ABR88885
LinkDB
All DBs
Position
complement(4001789..4003840)
Genome browser
AA seq
683 aa
AA seq
DB search
MEHCILKVALDTPLDFCFDYVWVLTEAEPTRPLPGQLALVPFGRREVVGLVVAVHDTTDV
PLDKLKAAIAVRTQLAPLSAEWIALCAFAADYYQRPLGEVAIPGLPKNLRALKTTSLDKA
VKKLGKLDAVHDATPIAMPQLNEAQQQAADAIATASGFAPTLLYGVTGSGKTEVYLQAAA
QILAHSKEDDNPAQILILVPEINLTPQLEANVRARFPGVMVATLHSGLAEGERMTHWLAA
HLGQARIILGTRLAILSSLPQLKLIIVDEEHDPSYKQQEGLRYSARDLAVWRAHQLSIPI
VLGSATPSLETWHHAQSGRYRKLELRERAVKDAVLPKVGLIDLERKAPREQMTEGISATL
IAALKLRMERGEQSLLFLNRRGYAPVIACDSCGWISNCTRCSAFLVLHKLDKRLRCHHCG
FEQRIPKSCPTCGNVDLQPLGRGTQRVEESLQLIFPEARIMRIDADSTRRKGSAQEAFDT
VHRGEVDILIGTQMVAKGHDFQNLTLVGVLNPDTALFSHDYRASERLFAQLMQVAGRAGR
VAQKEGGSASEVLIQTRYPQHPLYAAVRTHDYDTFATELLEERQQAHFPPFIYQALLRAE
AKEIKIALDFLHDAIACVDYPGITMNDPIPMTMTRVANVDRAQLLVECTSRPALQAFLKI
WIAALREMKTRVRWSLEVDPVDI
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
gtggaacactgcatccttaaagtcgccctcgacacaccgctggatttctgtttcgactat
gtatgggtcttgaccgaagccgagccgacccgccccctgccgggacaactggccctggta
cctttcggccggcgcgaggtggtcggcctggtggtggcggtccatgacacgacggatgtg
cctctggataaactcaaggcggccatcgcagtacgtacgcaactggcgccgctgtcagcc
gaatggattgcgctgtgcgcattcgcggccgattattaccagcgtcctttgggcgaggtg
gcgattccgggcttgccgaaaaacctgcgtgcactgaaaacgacttcgctggataaggcg
gtcaagaaactgggcaagctggatgccgtgcacgatgcgaccccgatcgcaatgccgcaa
ctgaacgaggcgcaacagcaagccgccgatgccattgcaacagccagcggtttcgcaccg
accttattgtatggcgtcaccggcagtggcaagaccgaggtctacctgcaggccgcagcg
cagatcctggcgcatagcaaggaagatgataaccctgcgcaaatcctgatcttggtgccg
gaaatcaacctgacgccgcaactggaagcgaatgtgcgtgcgcgtttccccggcgtcatg
gtcgccaccctgcatagcgggctggccgagggcgagcgcatgacgcactggctggctgcg
cacctggggcaggcgcgcatcatattgggtacgcgcctggcgatcctgtcttcactgccg
cagctgaaactgatcatcgtcgatgaagaacatgatccttcttataagcagcaagagggt
ttgcgctattcggcacgtgacctggctgtctggcgtgcgcatcaattaagtattccgatc
gtgctgggttccgccactccatcgctggaaacctggcatcacgcgcaatccggtcgctac
cgcaaactggaattgcgcgaacgggcggtcaaggatgccgttttacccaaagtcggcctg
attgacctggagcgcaaggcgccgcgcgaacaaatgacagaagggatcagcgcgacactg
attgctgcgttgaaattgcgcatggagcgcggcgagcaatccttgctgttcctgaaccgc
cgcggttatgcgccggtgattgcctgtgattcctgcggctggatcagtaattgcacgcgt
tgcagcgccttcctggtattgcataaactggacaagcgcctgcgctgccatcattgcggc
tttgaacaacggatacccaaatcctgccccacctgcggtaacgtcgacttgcagcctttg
ggccgcggcacgcaacgggtggaagaaagcctgcaattgatttttccggaagcccgcatc
atgcgtatcgatgccgattcaacgcgacgcaagggcagtgcgcaggaagccttcgatacc
gtgcacaggggagaagtcgatatcctgatcggcacgcaaatggtagcgaagggacatgac
ttccagaacctgacgctggtcggtgtgctgaacccggacactgcattgttttcacatgat
taccgcgccagcgaacgcctgtttgcgcaattgatgcaggtggcaggacgtgccggccgg
gtcgcacaaaaagaaggtggcagtgcgagcgaggtgctgatccagacacgttatccgcag
catcccttgtacgcagcggtgcgcacgcatgactacgacaccttcgcaacggaactgctg
gaagagcggcagcaggcacatttcccgcctttcatataccaggctttattgcgcgccgaa
gcgaaggaaatcaagatcgcattggacttcctgcatgacgcgattgcatgtgtcgattat
ccgggcatcacaatgaatgacccgatcccgatgacgatgacccgcgtggcgaatgtagac
cgcgcgcaattgctggtcgaatgtacgtcgcgtccggccttgcaggctttcctgaaaatc
tggatcgccgccttgcgcgagatgaagacgcgggtgcgttggtcacttgaagttgatccg
gtcgatatttaa
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