KEGG   Methylomonas methanica: Metme_0162
Entry
Metme_0162        CDS       T01511                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
mmt  Methylomonas methanica
Pathway
mmt03030  DNA replication
mmt03410  Base excision repair
mmt03420  Nucleotide excision repair
mmt03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mmt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Metme_0162
   03410 Base excision repair
    Metme_0162
   03420 Nucleotide excision repair
    Metme_0162
   03440 Homologous recombination
    Metme_0162
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mmt03032]
    Metme_0162
   03400 DNA repair and recombination proteins [BR:mmt03400]
    Metme_0162
Enzymes [BR:mmt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Metme_0162
DNA replication proteins [BR:mmt03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Metme_0162
DNA repair and recombination proteins [BR:mmt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     Metme_0162
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Metme_0162
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_2 DNA_pol_lambd_f HHH_5
Other DBs
NCBI-ProteinID: AEF98611
UniProt: F9ZYR5
LinkDB
Position
complement(173401..176157)
AA seq 918 aa
MSAHSANTLILVDGSSFLFRAFHAVPPLSNAQGLPTNAVYGVSNMLRKLINDYDTPYVTV
VFDAPGKTFRHDLYDQYKAHRPPMPDDLRVQIEPLHELIRALGLPLIIEHGVEADDVLGS
LAQNAARQGFHVVISSGDKDMAQLVTDRITLENSMTNTRMDIAGVEEKFGVKPEQIIDYL
ALMGDAVDNIPGVPKVGPKTAAKWLQQYGTLDNLVAHADEIKGKIGDNLREALPQLPLSQ
ELTTIKCDVALHYSLDDLKRREPDIAALKQQLGSLGFSSWLKTLNGNATSAPAAGKGTDN
TVADSPANSQEPAAALAKEYQTLLNQAEFEHWLAKLQQAELFAFDTETTSLNYSDAEIVG
VSFAVTAGQAAYVPLAHDYPEVPNQLDRQTVLDALRPLLEDPNKPKLGQNLKYDAHILAN
HGIKLRGIQHDTMLESYVLNSTASKHNMDDLAKHYLGVDTIHFEDVAGKGAKQIGFQEVP
IEQAGQYAAEDADITLRLHQTLSAQLQQQPRLWGLYREIEIPLIDVLVRIEENGVLIDSA
MLDQQSLELANRMAGIEQQAHDLAGSAFNLGSPKQIQEILYERLKLPVLKKTPKGQPSTD
ESVLQELALDYGLPKLILEFRGMSKLKSTYTEKLPQQINRRTGRVHTSYHQAVAATGRLS
SSDPNLQNIPIRSEEGRKIRQAFIAPPGYKIVAADYSQIELRIMAHLSGDAGLLAAFSQG
VDVHSATAAEVFEVGLDQVTPDLRRSAKAINFGLIYGMSAFGLAQQLGLSRNQAQAYIDL
YFSRYPGVKQYMDNIREQAKQQGYVETLFGRRLYLPDINARNAAQRQYAERTAINAPMQG
TAADIIKRAMIACDAWIRDSGADLKMIMQVHDELVFEVAEPHLNDCVTKIRDMMSAAADL
HVPLLVEVGCGENWDQAH
NT seq 2757 nt   +upstreamnt  +downstreamnt
atgtccgcacattccgccaacactctgattctggtcgacggctcgtcgtttttattccgc
gcctttcatgccgtaccgcccttgagcaatgcccaaggcctaccgaccaatgccgtatac
ggcgtgtccaacatgctgcgtaaattgatcaacgattacgataccccatatgtgacggtg
gtattcgacgcacccggcaagacattccggcacgatttatacgatcagtacaaggcgcac
cggccgccgatgccggacgatttgcgggtgcagattgagcctttgcacgagttgatccgg
gcgctgggcctgcccttgatcatcgagcacggcgtggaagccgacgatgtgttgggcagt
ctggcgcaaaatgccgcccggcaaggctttcatgtggtgatttcctccggcgacaaggat
atggcgcaattggtcaccgaccggatcacgctggaaaactccatgaccaatacccgcatg
gacattgcaggggtggaggaaaaattcggcgtcaaacccgaacaaatcatcgattaccta
gccttgatgggcgatgcggtggataacattcccggcgtacccaaggtgggcccgaaaacc
gccgccaaatggctgcagcaatacggcacgttggataatctggtcgcgcatgccgacgaa
atcaaaggcaagatcggcgacaatttgcgcgaagccttgccgcaactgccactgtcgcag
gaattgaccaccatcaaatgcgacgtggctttgcattacagcctggacgatttaaagcgc
cgggaaccggatatcgctgccttgaaacagcaattgggcagcttgggcttcagcagttgg
ctgaagactttaaacggcaatgctaccagcgccccagcggctggaaagggcactgataat
actgttgccgattcccccgcaaacagtcaagaacccgcggccgcattagccaaagaatac
caaaccctccttaatcaagccgaatttgagcattggctggctaaactccagcaagccgag
ttgtttgcattcgataccgaaaccaccagcttgaattacagcgacgcggaaatcgtcggc
gtctcgtttgcagtcaccgccgggcaggcggcttatgtgccgttggcgcacgattatcca
gaagtgccgaaccaactggatagacaaaccgtactggatgccctgcggccgctactggaa
gacccgaacaagccaaaactggggcaaaacctgaaatacgacgcgcacattctggccaat
cacggcatcaaactgcgcggcattcaacacgacaccatgttggaatcctacgtgttgaac
agcacggccagcaaacacaatatggacgatctggccaagcattatctgggcgtggacacc
atacatttcgaggacgtggccggcaagggcgccaagcaaatcggttttcaggaagtgcct
atcgagcaggccggccaatatgccgcggaggacgccgatatcaccttgcgtctgcatcaa
accctgtcggcccaattgcaacaacagccgcgtttatggggcttataccgggagatcgaa
attccgctgatagacgtactggtacgcatcgaagaaaacggcgttttgatcgacagcgcc
atgctggatcagcaaagcctggagctggcgaatcgcatggccggtattgagcaacaagcc
catgatctggccggctcggcgtttaatttgggctcccccaaacagattcaggaaatttta
tacgagcgcctgaaattgccggtgctgaaaaaaaccccaaaaggccagccctccaccgac
gagtcggtattgcaggaactggcgctggattatggcttgcccaagctgattctggaattc
cgcggcatgagcaagctgaaatccacctataccgaaaaactgccgcaacaaatcaatcgc
cgcaccgggcgggtgcatacctcgtatcatcaggcggtggcggccaccgggcgtttgtcg
tcgtccgaccccaacctgcagaatattccaatccgcagcgaagagggccgcaaaatacgc
caagcctttatcgcaccgccgggctacaaaatcgtcgccgccgactattcgcaaatcgaa
ttgcgcatcatggcgcatttgtccggcgacgccggcttgctggcggccttctcgcaaggc
gtggatgtacacagcgccacggcggcggaagtattcgaagtcggtctggatcaagtcacc
cctgatttacgccgctccgccaaggccatcaacttcggtttaatctacggcatgtcggct
ttcggcctggctcagcaactgggattatcccgcaatcaagcgcaagcctatattgatcta
tacttcagtcgctaccctggtgtgaagcaatatatggataacattcgcgaacaggctaag
cagcagggttatgtggaaaccctgttcggccgccgcctgtatttgccggatatcaacgcc
cgcaatgccgctcagcgccaatatgccgaacgtacggccattaacgcgccgatgcagggc
actgccgccgacatcattaagcgggccatgattgcttgtgacgcctggatacgcgacagc
ggtgccgacctgaaaatgatcatgcaagtgcatgacgaattagtgttcgaagtggcggag
ccgcatctgaacgattgcgtgaccaagatacgcgacatgatgtcggccgcggccgatttg
catgttccgctgctggtggaagtgggttgcggcgaaaattgggaccaagcgcattaa

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