Entry |
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Name |
(GenBank) DNA polymerase I
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KO |
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Organism |
mmt Methylomonas methanica
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:mmt00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Metme_0162
03410 Base excision repair
Metme_0162
03420 Nucleotide excision repair
Metme_0162
03440 Homologous recombination
Metme_0162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:mmt03032]
Metme_0162
03400 DNA repair and recombination proteins [BR:mmt03400]
Metme_0162
Enzymes [BR:mmt01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Metme_0162
DNA replication proteins [BR:mmt03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Metme_0162
DNA repair and recombination proteins [BR:mmt03400]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Metme_0162
NER (nucleotide excision repair)
GGR (global genome repair) factors
Metme_0162
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(173401..176157)
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AA seq |
918 aa
MSAHSANTLILVDGSSFLFRAFHAVPPLSNAQGLPTNAVYGVSNMLRKLINDYDTPYVTV
VFDAPGKTFRHDLYDQYKAHRPPMPDDLRVQIEPLHELIRALGLPLIIEHGVEADDVLGS
LAQNAARQGFHVVISSGDKDMAQLVTDRITLENSMTNTRMDIAGVEEKFGVKPEQIIDYL
ALMGDAVDNIPGVPKVGPKTAAKWLQQYGTLDNLVAHADEIKGKIGDNLREALPQLPLSQ
ELTTIKCDVALHYSLDDLKRREPDIAALKQQLGSLGFSSWLKTLNGNATSAPAAGKGTDN
TVADSPANSQEPAAALAKEYQTLLNQAEFEHWLAKLQQAELFAFDTETTSLNYSDAEIVG
VSFAVTAGQAAYVPLAHDYPEVPNQLDRQTVLDALRPLLEDPNKPKLGQNLKYDAHILAN
HGIKLRGIQHDTMLESYVLNSTASKHNMDDLAKHYLGVDTIHFEDVAGKGAKQIGFQEVP
IEQAGQYAAEDADITLRLHQTLSAQLQQQPRLWGLYREIEIPLIDVLVRIEENGVLIDSA
MLDQQSLELANRMAGIEQQAHDLAGSAFNLGSPKQIQEILYERLKLPVLKKTPKGQPSTD
ESVLQELALDYGLPKLILEFRGMSKLKSTYTEKLPQQINRRTGRVHTSYHQAVAATGRLS
SSDPNLQNIPIRSEEGRKIRQAFIAPPGYKIVAADYSQIELRIMAHLSGDAGLLAAFSQG
VDVHSATAAEVFEVGLDQVTPDLRRSAKAINFGLIYGMSAFGLAQQLGLSRNQAQAYIDL
YFSRYPGVKQYMDNIREQAKQQGYVETLFGRRLYLPDINARNAAQRQYAERTAINAPMQG
TAADIIKRAMIACDAWIRDSGADLKMIMQVHDELVFEVAEPHLNDCVTKIRDMMSAAADL
HVPLLVEVGCGENWDQAH |
NT seq |
2757 nt +upstreamnt +downstreamnt
atgtccgcacattccgccaacactctgattctggtcgacggctcgtcgtttttattccgc
gcctttcatgccgtaccgcccttgagcaatgcccaaggcctaccgaccaatgccgtatac
ggcgtgtccaacatgctgcgtaaattgatcaacgattacgataccccatatgtgacggtg
gtattcgacgcacccggcaagacattccggcacgatttatacgatcagtacaaggcgcac
cggccgccgatgccggacgatttgcgggtgcagattgagcctttgcacgagttgatccgg
gcgctgggcctgcccttgatcatcgagcacggcgtggaagccgacgatgtgttgggcagt
ctggcgcaaaatgccgcccggcaaggctttcatgtggtgatttcctccggcgacaaggat
atggcgcaattggtcaccgaccggatcacgctggaaaactccatgaccaatacccgcatg
gacattgcaggggtggaggaaaaattcggcgtcaaacccgaacaaatcatcgattaccta
gccttgatgggcgatgcggtggataacattcccggcgtacccaaggtgggcccgaaaacc
gccgccaaatggctgcagcaatacggcacgttggataatctggtcgcgcatgccgacgaa
atcaaaggcaagatcggcgacaatttgcgcgaagccttgccgcaactgccactgtcgcag
gaattgaccaccatcaaatgcgacgtggctttgcattacagcctggacgatttaaagcgc
cgggaaccggatatcgctgccttgaaacagcaattgggcagcttgggcttcagcagttgg
ctgaagactttaaacggcaatgctaccagcgccccagcggctggaaagggcactgataat
actgttgccgattcccccgcaaacagtcaagaacccgcggccgcattagccaaagaatac
caaaccctccttaatcaagccgaatttgagcattggctggctaaactccagcaagccgag
ttgtttgcattcgataccgaaaccaccagcttgaattacagcgacgcggaaatcgtcggc
gtctcgtttgcagtcaccgccgggcaggcggcttatgtgccgttggcgcacgattatcca
gaagtgccgaaccaactggatagacaaaccgtactggatgccctgcggccgctactggaa
gacccgaacaagccaaaactggggcaaaacctgaaatacgacgcgcacattctggccaat
cacggcatcaaactgcgcggcattcaacacgacaccatgttggaatcctacgtgttgaac
agcacggccagcaaacacaatatggacgatctggccaagcattatctgggcgtggacacc
atacatttcgaggacgtggccggcaagggcgccaagcaaatcggttttcaggaagtgcct
atcgagcaggccggccaatatgccgcggaggacgccgatatcaccttgcgtctgcatcaa
accctgtcggcccaattgcaacaacagccgcgtttatggggcttataccgggagatcgaa
attccgctgatagacgtactggtacgcatcgaagaaaacggcgttttgatcgacagcgcc
atgctggatcagcaaagcctggagctggcgaatcgcatggccggtattgagcaacaagcc
catgatctggccggctcggcgtttaatttgggctcccccaaacagattcaggaaatttta
tacgagcgcctgaaattgccggtgctgaaaaaaaccccaaaaggccagccctccaccgac
gagtcggtattgcaggaactggcgctggattatggcttgcccaagctgattctggaattc
cgcggcatgagcaagctgaaatccacctataccgaaaaactgccgcaacaaatcaatcgc
cgcaccgggcgggtgcatacctcgtatcatcaggcggtggcggccaccgggcgtttgtcg
tcgtccgaccccaacctgcagaatattccaatccgcagcgaagagggccgcaaaatacgc
caagcctttatcgcaccgccgggctacaaaatcgtcgccgccgactattcgcaaatcgaa
ttgcgcatcatggcgcatttgtccggcgacgccggcttgctggcggccttctcgcaaggc
gtggatgtacacagcgccacggcggcggaagtattcgaagtcggtctggatcaagtcacc
cctgatttacgccgctccgccaaggccatcaacttcggtttaatctacggcatgtcggct
ttcggcctggctcagcaactgggattatcccgcaatcaagcgcaagcctatattgatcta
tacttcagtcgctaccctggtgtgaagcaatatatggataacattcgcgaacaggctaag
cagcagggttatgtggaaaccctgttcggccgccgcctgtatttgccggatatcaacgcc
cgcaatgccgctcagcgccaatatgccgaacgtacggccattaacgcgccgatgcagggc
actgccgccgacatcattaagcgggccatgattgcttgtgacgcctggatacgcgacagc
ggtgccgacctgaaaatgatcatgcaagtgcatgacgaattagtgttcgaagtggcggag
ccgcatctgaacgattgcgtgaccaagatacgcgacatgatgtcggccgcggccgatttg
catgttccgctgctggtggaagtgggttgcggcgaaaattgggaccaagcgcattaa |