Methylomonas methanica: Metme_0492
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Entry
Metme_0492 CDS
T01511
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mmt
Methylomonas methanica
Brite
KEGG Orthology (KO) [BR:
mmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmt03400
]
Metme_0492
DNA repair and recombination proteins [BR:
mmt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Metme_0492
Archaeal homologous recombinant proteins
Metme_0492
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_29
SMC_N
AAA_23
AAA_21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AEF98936
UniProt:
G0A2C4
LinkDB
All DBs
Position
complement(525596..529045)
Genome browser
AA seq
1149 aa
AA seq
DB search
MKILNIFFKNINSLEGEGRVYFDQGPIADSGVFAITGPNGSGKSSILDVITLGLYGETFR
FDKPAAHVMTKQTDECFAQVEFALGEHTYRSTWQAKRSDTSEDAITLLPKMTLTRLNGQE
LLLAETPNQVRHRIAELTGMDFHKFSKSIVLPQGDFAAFLNALDSERMDILEKIGGANLY
ADYRQQTEARFNQTQTRLTQLQQDIGSLPLLNREALEAAEQDLEDFKEQVSEIKQQQAQT
QQHLAVVQNVADLEDKQQKLQGQRQSLQKKIQEYQDDLQRIANNQQALEFRTEVAFLDTK
QALIEQNQATLDSYRKELSMLQTQLGTQDSPLTGPVSEKSLSEQKQAVDALKLSLSELKL
ELPRQRELAQSIQQQLADNRTRLAEIDVWFQAHQADASLLEDFPDVVRLRKLRTERIELG
GKRKSQAGWSKNITGALKKNKSALQSTEEDLSDLKARIEADQQSLHDIAPDKNLEQLQEL
QQEQQARVADLQELLSLASVTAKLSDHGLLGWLGIKRRTDIAPNIDELQARLDELTQEMS
REENIIKVLEQALRNEALIKKMSADRAKLVDGKPCYLCGSTTHPYVLKPPVLTDAKAALV
DQRGKIQALKSTIDIASTKLKTAQKFGSQQSAKQQRLQQMHSQWTTLANRLNIMRDGMDI
DNLSLQKHLLTQETEELNKVNNLVKQHAQLQRNIAKMTADIASKQAAQERLTKTVRDLEA
EWANRPPEFDEIEQRYATCEAEEKALIEKLENQLSKLGEKLPGKGKENALFDRLNSRRQD
YQVYLLRQEGLQKEMAALTRQLEECENKIAHYQAQISSNTESLGQQEQLSLQIAIIEKQK
LIVDQEQQLRVSQIEYKTIAQTLSDKMAGTAFTTVDEIRDLMHLIAREADIRQQLDSDTS
KLAEIERQKQELAALLDNELAAVLANKLSEPEIRQVLKQLTQQLDIAEQEVQTLENKLAK
QQQYREKHQTLHEQLAAEQQLFSQAQAELKTINDDPAGFRRQIQQLMTDKLLAQTNLILE
KLSGRYYVRSGSSEHGLALEIEDTKQKNVHRSPQTLSGGESFVVSLALALALAEIANNGK
AIDSLFLDEGFGNLDAESLYLAMSTLENLKTHGKTVGVISHVEGVKKRIKTQIELVKKPN
GLSELKLVA
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcttaatatatttttcaaaaacatcaattctctggaaggcgaagggcgggtt
tatttcgatcagggcccgattgccgacagcggggtttttgccattaccggccccaacggc
tccggaaaatccagcattttggatgtgatcaccctggggctgtacggcgaaaccttccgt
ttcgataaaccggccgcgcacgtgatgaccaagcaaaccgacgaatgcttcgcacaggtt
gaattcgccttgggagaacatacataccgttcgacttggcaggccaaacgcagcgatacc
agcgaagatgcgattacgctgttaccgaaaatgactctgacccggctgaacggtcaggaa
ttattactggcggaaacacccaatcaggtccgacatcggattgccgagctgaccggcatg
gattttcacaaattcagtaaatccatcgtattaccgcagggtgattttgccgccttcctg
aatgcgctggacagcgagcgcatggatattctggaaaaaatcggcggcgccaatctttat
gccgattatcgccagcaaaccgaggctcgatttaatcagacgcaaacccgtttgacccaa
ttacaacaggatatcggcagcctgccgctcttaaaccgggaagcgctggaagccgccgaa
caagatctggaggatttcaaggaacaagtatcggaaatcaaacagcagcaagcacaaacc
caacaacatctggcggttgtgcaaaatgtcgccgacctggaagacaagcaacaaaaacta
caaggacaacggcaaagccttcagaaaaaaattcaggaatatcaagacgatttgcaacgt
attgccaacaatcagcaggctctggaatttcgcaccgaagtcgcttttctggataccaag
caagccctaatcgagcagaatcaggccactttggacagttaccggaaagagctgtccatg
ttgcaaacgcaactaggcactcaagacagcccgctgaccgggcccgtttcggaaaaatcg
ctgagcgaacaaaaacaggcggtggatgcgcttaaattgtcgcttagcgaattaaagctg
gaattgcccaggcaacgggaactggcgcaatccatacaacagcaactggccgacaatcga
acccgcttggcggaaatagacgtgtggtttcaggcacatcaagccgatgccagcctgctg
gaagactttcccgacgtagtccgcttacgtaaactcaggaccgaacgcatcgagttaggc
ggcaagcgaaaatcccaggccggttggtccaaaaatatcaccggcgcgttgaagaaaaac
aagtccgcgctgcaatccaccgaggaagatctaagcgacttaaaagcccggatcgaagcc
gatcaacagtctttgcacgatattgccccggacaaaaacttagagcaactgcaggaatta
cagcaggaacaacaggcgcgggtcgccgacctgcaggaactgctatccttggccagtgta
accgccaaactcagcgaccacggcctgttgggttggctgggcatcaaaaggcgcacggat
atcgccccgaatatagacgaattacaggccaggctggatgagctcacccaggaaatgagc
agggaagaaaacatcatcaaagtgctcgagcaagcactgcggaatgaagcgctgatcaaa
aaaatgtccgccgaccgcgccaaactggtggatggcaaaccttgctatttatgcggatcg
accacccatccttatgtactgaaaccgccggttcttaccgatgccaaggccgcattggtg
gatcaacgcggcaagatacaagcgcttaaatcgactatcgatattgccagcaccaagtta
aaaacggcgcaaaaattcggctcgcaacagtctgccaaacaacagcgtctgcaacaaatg
cattcgcaatggactacgctggccaaccgcctgaatatcatgcgcgacggtatggacatc
gataatctgtctctgcaaaaacacctgctgacacaagaaacggaagagctgaataaagtc
aacaacctggtgaaacaacacgcccagttgcaacgcaacatcgccaaaatgacagccgac
attgccagcaaacaagccgcgcaggaacgactgaccaaaacggtgcgggacctggaagcg
gaatgggccaatcgcccgcctgaattcgatgaaattgaacagcgctacgcgacctgcgaa
gctgaagaaaaagccctgatcgaaaaactggaaaaccagctgagtaaattgggcgaaaag
ctgcccggcaagggcaaggaaaacgccttgttcgaccggctgaacagccggcgccaggat
tatcaggtgtatctgctacgccaggaaggactgcaaaaggaaatggcagcactcacccga
caattggaagagtgcgaaaataaaatcgcccactatcaggcacagataagcagcaatacc
gaaagcttggggcagcaagagcaactgagcttgcaaatcgccattatcgaaaaacaaaaa
ctgatcgtcgatcaggagcaacaattacgcgtctcgcaaattgaatacaaaaccatagcg
caaaccttgagcgacaaaatggccggtaccgcgtttaccacggtggacgaaattcgcgac
ctcatgcacctgattgcccgggaagccgacattcggcaacaactcgattcggatacgtca
aaactggcggaaatcgaacggcaaaagcaagaactggctgccttgcttgataatgaactc
gctgcggtattagccaataagttgtccgagccggaaatccggcaagtgcttaagcaactt
acccaacagctggatatcgccgaacaggaagtgcaaaccctggaaaacaaactggccaag
cagcaacagtaccgggaaaaacaccagaccttgcacgaacaacttgccgcggaacagcag
ctattcagtcaggcgcaggccgaactcaagacgatcaacgacgacccggccggcttcaga
cgccaaatacagcaactgatgacggacaaactactggcgcaaaccaacttgattctcgaa
aagctcagcggccgttattatgttcgtagcgggtccagcgaacacgggctagcgctggaa
atagaagacaccaaacagaaaaatgtacaccgttcgccgcaaaccctgtccggcggggaa
agttttgtagtgagtctggcattggcgctggcgctagcggaaatcgccaataacggcaaa
gcaatcgactcgctatttttggacgaaggattcggcaatctggatgccgaatcgctttat
ttagcgatgagcacgctggaaaacctgaaaacgcacggcaaaaccgtcggcgttatttcg
catgtggaaggggtgaaaaaacgcatcaaaacgcaaatcgagctggtgaaaaaacccaac
ggcctcagcgaactgaagttggtagcctga
DBGET
integrated database retrieval system
