Methylomonas methanica: Metme_0805
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Entry
Metme_0805 CDS
T01511
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mmt
Methylomonas methanica
Pathway
mmt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Metme_0805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmt03019
]
Metme_0805
03110 Chaperones and folding catalysts [BR:
mmt03110
]
Metme_0805
03029 Mitochondrial biogenesis [BR:
mmt03029
]
Metme_0805
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmt04147
]
Metme_0805
Enzymes [BR:
mmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Metme_0805
Messenger RNA biogenesis [BR:
mmt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Metme_0805
Chaperones and folding catalysts [BR:
mmt03110
]
Heat shock proteins
HSP60 / Chaperonin
Metme_0805
Mitochondrial biogenesis [BR:
mmt03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Metme_0805
Exosome [BR:
mmt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Metme_0805
Exosomal proteins of other body fluids (saliva and urine)
Metme_0805
Exosomal proteins of breast cancer cells
Metme_0805
Exosomal proteins of colorectal cancer cells
Metme_0805
Exosomal proteins of bladder cancer cells
Metme_0805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AEF99244
UniProt:
G0A5W7
LinkDB
All DBs
Position
864837..866486
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKDVKFGGEARALMAQGVNILANAVKVTLGPKGRNAVLDKSFGAPTITKDGVSVAKEI
ELQDKFENMGAQMVKEVASKTSDVAGDGTTTATVLAQSIVNEGLKSVAAGMNPMDLKRGI
DMAVNAAVSAIEKAATPCSDSKAIAQVGTISANSDESVGEIIAEAMDKVGKEGVITVEEG
TGLNNELDVVEGMQFDRGYLSPYFINKQESMSVELDDPFVLLYDKKISNIREMLPILEGV
AKSGRSLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLEDIAVLTGGTV
ISEEVGLSLEKAELDQLGTAKRVQINKENTTIIDGAGDEAQIKGRVAQIRAQAEEATSDY
DREKLQERLAKLAGGVAVIKVGAATEMEMKEKKARVEDALHSTRAAVEEGVVAGGGTALI
RALSALEGLQGNNHDQTVGINILRRAMEEPLRQIVTNAGDEASVVLNEVRKGSGNFGYNA
ATGEYGDMIQMGILDPAKVTRSALQNAASVAGLMITTEVMVADAPADSKAPAMPDMGGMG
GMGGMGGMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacgtaaaattcggcggtgaagcccgtgccttaatggcgcaaggcgtt
aatattttagcaaacgcagtaaaagttaccctgggccctaaaggccgtaatgcagtattg
gacaaaagcttcggcgcgccaaccatcaccaaagacggtgtatccgtagctaaagagatc
gaattacaagacaaattcgaaaacatgggtgcgcaaatggttaaagaagtggcgtccaaa
acgtccgacgtggccggcgacggtaccactactgcaaccgttttggcgcaatccatcgtt
aacgaaggtttaaaatcagttgccgcgggcatgaaccctatggatctgaaacgcggtatc
gatatggcggtaaacgccgcggttagcgcgatcgaaaaagccgctacaccatgcagcgac
agcaaagcaattgcgcaagtaggcaccatctcagccaactcagacgagtctgttggtgaa
atcatcgccgaagccatggacaaagtaggcaaagaaggcgttatcaccgttgaagaaggc
accggcttgaacaacgaattggatgtcgtggaaggtatgcagttcgaccgcggttatctg
tcgccttacttcatcaacaaacaagaaagcatgagcgtcgagttggacgatcctttcgta
ttgttgtacgacaaaaaaatctccaacatccgtgaaatgttgcctattctggaaggcgtg
gccaaatcaggccgctctttgctgatcatcgccgaagatgtggaaggcgaagcgctggcg
actctggttgtcaacaacatgcgcggtatcgtgaaagtcgctgctgttaaagcaccgggt
ttcggcgatcgccgtaaagccatgctggaagacattgccgttctgaccggcggtaccgtg
atttccgaagaagtgggcctgtcgttggaaaaagccgagctggaccaactgggtaccgcg
aaacgcgtacaaatcaacaaagaaaacaccaccatcatcgacggcgctggcgacgaagct
caaatcaaaggtcgtgtggcacaaattcgcgcccaagctgaagaagcgacttccgattac
gatcgtgagaaactgcaagagcgtctggccaaactggctggcggtgtagcggtaatcaaa
gtcggtgctgctaccgagatggaaatgaaagagaagaaagcccgcgtggaagacgcgctg
cactcaacccgtgcagcggttgaagaaggtgtggttgccggtggcggtactgccctgatc
cgtgcgttgtctgctctggagggtctgcaaggcaacaaccacgatcaaaccgtgggtatc
aacatcttgcgccgtgcaatggaagagcctttgcgtcaaatcgtcaccaacgcaggcgat
gaagcctccgtggtattgaacgaagtcagaaaaggcagcggtaacttcggttacaacgcg
gcgactggcgaatatggcgatatgatccaaatgggtattctggacccggccaaagtcacc
cgttccgcgttgcaaaatgcagcgtcggttgccggtctgatgattaccaccgaagtaatg
gtggccgatgcgccggctgacagcaaagctccggcaatgcctgatatgggcggcatgggc
ggtatgggcggcatgggcggcatgatgtaa
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