Methylomonas methanica: Metme_1038
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Entry
Metme_1038 CDS
T01511
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mmt
Methylomonas methanica
Brite
KEGG Orthology (KO) [BR:
mmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmt03016
]
Metme_1038
Enzymes [BR:
mmt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Metme_1038
Transfer RNA biogenesis [BR:
mmt03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Metme_1038
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Acb1
Motif
Other DBs
NCBI-ProteinID:
AEF99474
UniProt:
F9ZV41
LinkDB
All DBs
Position
1115473..1115982
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AA seq
169 aa
AA seq
DB search
MKRLFFALWPNQDTRRQCNQLSLKMLGCGKPVAANNLHVTLLFLGLVDAAGQQAVSKAAC
RIAIEPFCLAFDRVDFWKKPAIVCLRAEQVDRVLSTWVETLTVAALENGIAVDQRPYKPH
VTLLRKAKQLPVAEFEPIIWRAEGFCLVESCSTPSGVEYRVLERWGLSA
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggctgttttttgcgctttggccaaatcaagatactcgccggcaatgcaatcaa
ctctcgctgaaaatgctcggttgcggcaagccggtcgcagccaacaacctgcatgtaacg
ttgttatttttagggttggtcgacgctgccgggcaacaggccgtgagcaaagccgcatgc
cgtatcgccattgagccgttttgcctggcgtttgaccgggttgatttttggaaaaaaccg
gcaattgtgtgcttgagagccgaacaggtcgatagggttttgtcgacttgggtggagaca
ttaacggttgcggctttagaaaacggcatagcggtcgaccagcggccctataagccgcat
gtcactttattgcggaaagccaagcaattgcctgttgccgaattcgagccgattatttgg
cgggctgaagggttttgcctggtggaatcctgctccactccgtcgggagtggagtatcgt
gtgctggaacgctggggtctctcggcttaa
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