Methylomonas methanica: Metme_1287
Help
Entry
Metme_1287 CDS
T01511
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mmt
Methylomonas methanica
Pathway
mmt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Metme_1287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmt03019
]
Metme_1287
03016 Transfer RNA biogenesis [BR:
mmt03016
]
Metme_1287
Enzymes [BR:
mmt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Metme_1287
Messenger RNA biogenesis [BR:
mmt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Metme_1287
Transfer RNA biogenesis [BR:
mmt03016
]
Prokaryotic type
tRNA degradation factors
Metme_1287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
OB_RRP5_4th
S1_RRP5
KH-I_KHDC4-BBP
KH_2
DUF6160
S1_2
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
AEF99713
UniProt:
F9ZXA3
LinkDB
All DBs
Position
complement(1395076..1397154)
Genome browser
AA seq
692 aa
AA seq
DB search
MNPIRKQFQYGDRLVTLETGEIARQANGAVMIDVEGTSLLVTVVGKKEAAGGDFFPLTVN
YQEKAFAAGKIPGGFFKREGRPSENETLISRLIDRPIRPLFPEGFTNEVQIIATVVSLNP
EVDTEIPALLGASAALAVSGLPFNGPLGAACVGYKDGNYLLNPSLAAMKESQLQLVVAGT
AKAVLMVESQADLLPEDVMLGAVLFGHEQMQVAINAINELAAEVGTPAMAWTPVESDAAL
KAAVAAEAEAAIKAAYQVPEKLVRQDQLSAIRSAVVEKLTADDQYAEKDIRNIIEHLEYD
IVRGAILNDRKRIDGRDLTTVRPISIRTGVLPRTHGSALFTRGETQAIVVATLGTERDAQ
IIDALSGEYKDPFMLHYNFPPYSVGETGFVGSPKRREIGHGRLAKRGVAAVLPNMAEFPY
VIRVVSEITESNGSSSMASVCGSSLALMDAGVPIKAPVAGIAMGLIKEGDQFAVLSDILG
DEDHLGDMDFKVAGSENGVTALQMDIKIDGITPEIMKVALEQAKHGRLHILGEMNKALGA
TREEMSDFAPRIITFKIDPAKIREVIGKGGVTIRAITEQTGASIDLTDDGVVNVASVDRA
AGEEARRMIEEITAEVEVGKVYEGKVVRLMDFGAFVTILPGKDGLVHISQISEERVEKVS
DKLSEGDVVRVKVLEIDRQGRVRLSMKDIDSE
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcctatcaggaaacaatttcagtacggcgatcgtctcgtcacgttagaaaccggt
gaaatagcccgccaagccaatggcgcggtcatgattgatgtcgaaggcacctcattattg
gtgactgtcgttggtaaaaaagaagcggctggcggagactttttcccgttgaccgtcaac
taccaggaaaaagcctttgccgccggcaaaatccccggcggtttcttcaagcgcgaaggc
cgccccagcgaaaatgaaaccctgatctcccgcctgatagaccggcctatccgtccgttg
tttcccgaaggcttcactaacgaagtgcagatcattgccaccgtggtttctcttaacccg
gaagtggacaccgaaatccccgccctgctgggcgcatccgccgcgctggccgtttccggt
ctgccgttcaatggcccattgggcgctgcctgcgtcggttacaaagacggtaactatttg
ctgaacccgtcgttggcggccatgaaagaatcgcaattgcaactggtggttgccggtaca
gccaaagccgtactgatggtggaatcgcaagccgatctgctgccggaggacgtgatgctg
ggtgcggtactgttcggccacgaacaaatgcaagtggcgatcaacgccatcaacgaactg
gccgccgaagtcggtacgcctgccatggcctggactccggtcgaatccgacgccgcgctg
aaagccgccgtcgccgccgaagccgaagccgccattaaagcggcttaccaagtacctgaa
aaactggtcagacaagaccagctcagcgccattcgtagcgccgtggtcgaaaaactgacc
gccgacgaccaatacgccgaaaaagacattcgcaatatcatcgagcacctggaatacgac
atcgtgcgcggcgcgattctaaacgaccgcaaacgtatcgacggccgcgacctgaccacg
gtcagaccgatcagcatccgtaccggcgtcctgcccagaacccacggctccgccctgttc
acccgcggcgaaacccaagccatcgtggtggccaccctgggtaccgaacgcgatgcgcaa
atcatcgatgcattgtccggcgaatacaaagacccgttcatgctgcattacaacttccca
ccgtacagcgtgggcgaaaccggctttgtcggctcccccaaacgccgcgaaatcggccac
ggccgtttggcgaaacgcggtgtagctgcggtactgcctaacatggcggaattcccttac
gtaatccgcgtggtttcggaaatcaccgaatccaacggttccagctccatggcttccgtc
tgcggcagcagcttggcgctgatggatgccggcgtgccgattaaagcccccgtggccggt
attgcgatgggcttgatcaaagagggcgaccagttcgcggtattgtccgacatcctgggc
gacgaagaccacttgggcgacatggactttaaagtggccggttccgaaaacggcgtcacc
gcgctgcaaatggacatcaaaatcgacggtatcacacccgagattatgaaagtggctttg
gaacaagccaagcacggccgtttgcacatcctgggcgaaatgaacaaagccctgggcgca
acccgcgaggaaatgtccgacttcgcgccgcgcatcatcactttcaaaatcgacccggcg
aaaattcgcgaagtgatcggtaaaggcggcgtcaccatccgcgccatcaccgaacaaacc
ggcgccagcatcgatttgaccgacgacggcgtggttaacgtcgcctccgtcgaccgtgca
gccggcgaagaagcccgccgcatgatcgaagaaatcaccgccgaagtcgaagtcggcaaa
gtctacgaaggcaaagtggtacgtttgatggacttcggcgcctttgtcaccattctgccc
ggcaaagacggcttggtgcacatttcgcaaatctctgaggaacgtgtcgagaaagtcagc
gacaagttgtcggaaggcgatgtggttagagttaaggtgctggagattgaccgtcaagga
cgggtgagattgagtatgaaggatattgatagcgagtaa
DBGET
integrated database retrieval system
