Methylomonas methanica: Metme_1289
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Entry
Metme_1289 CDS
T01511
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mmt
Methylomonas methanica
Brite
KEGG Orthology (KO) [BR:
mmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmt03016
]
Metme_1289
Enzymes [BR:
mmt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Metme_1289
Transfer RNA biogenesis [BR:
mmt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Metme_1289
Prokaryotic type
Metme_1289
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AEF99715
UniProt:
F9ZXA5
LinkDB
All DBs
Position
complement(1397625..1398536)
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AA seq
303 aa
AA seq
DB search
MAKRKSGRDVHGIVLLDKRLGVSSNKALQEVRRLLNANKAGHTGSLDPLATGLLPLCFGE
ATKVSGLMLDDDKRYQVTLRLGQMTDTGDSEGTIVEEMPIPAFTETELLSSLQRFTGSIE
QVPPMYSALKHQGKKLYELAREGKTVERQPRRITIYALHLLDFDSETITLDVECSKGTYI
RSLAEDLGHAMGSCATVTALRRTAAGMFRLENAHTLEQLEAMSDAERMQCLIAVDAPLRQ
LPAVNLSTEQATCINHGRQIPIDGHAPGAVRMYSEQTFLGLGEILLNDKLAPKKLFNLNR
QVA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacgcaagtccgggcgcgatgtacacggcatcgtgctgctcgacaaacgcttg
ggcgtttcttccaacaaagccttgcaggaagtacgacgcttgttgaacgccaacaaggcc
ggccataccggcagcctggatcccctagctaccggcctgttaccgctgtgtttcggcgaa
gccaccaaagtatccgggttgatgctggacgacgataaacgttatcaggtaacgctgcgt
ttgggtcaaatgaccgataccggcgatagcgaggggactatcgtcgaggaaatgccgata
cccgcctttaccgaaaccgagttattgagcagtttacaacgctttaccggctctatcgag
caagtgccgccgatgtattcagccttgaagcatcagggcaaaaagctgtatgaactggcc
cgcgaaggcaagacagtagaacgtcagccgcgccggattactatttacgccctgcattta
ctcgacttcgatagcgaaaccatcacgctggacgtggaatgttccaaagggacttatatc
cgatcgttggcggaggatttggggcacgccatgggcagttgcgctaccgtaacggctctg
cgccgaaccgccgccggcatgttcagactggaaaacgcccatacgcttgagcaactggag
gccatgagcgacgcggaacgcatgcaatgtctgattgccgtggacgcgccgttgcggcaa
ctgccggcggtcaacctgtcgaccgagcaagccacctgcatcaatcacggccgacaaatt
ccgattgacggtcatgcgccgggcgccgtgcgcatgtatagcgaacaaacctttttaggt
ttgggagaaatccttttgaatgataaactagcgccgaaaaagttatttaatctgaaccgt
caagttgcttga
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