Methylomonas methanica: Metme_1415
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Entry
Metme_1415 CDS
T01511
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mmt
Methylomonas methanica
Pathway
mmt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Metme_1415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmt03400
]
Metme_1415
Enzymes [BR:
mmt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Metme_1415
DNA repair and recombination proteins [BR:
mmt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Metme_1415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AEF99838
UniProt:
F9ZYY3
LinkDB
All DBs
Position
complement(1546169..1549627)
Genome browser
AA seq
1152 aa
AA seq
DB search
MSHNLDSGIAVIHSNQLEALRDVVEYWLRQHPLAPLENEVLLVQSNGMGQWLKQSLAQNN
ALGIAAAMQIQLPSLFIWSVYRAVLGQQIPKEQPLAKAPLTWRLYRLLPVLITQTGFESL
AYFLQHDCNGRKRFQLAEQLADLFDQYQVYRSDWINDWAAGRDIFRDAHGQPLPLPERQI
WQSHLWRAVLADLGGDCNPFASRASVHAQFMATVDTLEQRPAGIPRRIMLFGLSSLPQQS
LEVLAKLGTFCQIVLFVHNPCQHYWADIIEDKELLKAQRKRQSYKAGMAAGLTPEELHLH
ANPLLAAWGKQGRDYIRLLDHFDETRAYAGWHWPEQKIDLFQDYGDDGQRSLLQRLQQSI
LDLEPVPEQPLLLDKADDSLAFHIAHSPQREVEILHDQLLARFNAAEQAGDKLHPRDIIV
MVPDINLYAPHIRAVFGQVQAEDPRYIPFSLADQQQRGENPLLVAVETLLNLPESRFNVS
EFLGLLEVPSLRLRFGLDETAIPKIHQWLEQAGIRWGLNAEQRTRAVDMPADFAANTWQF
GLRRMLLGYAVGAGDAFNGIEPYPEIGGLDAQWLGHLCHILDTLERYADSLGRELHAEAW
LQVLTQLLDDFFVADNERDRKTLDTLTVALDKWHQACLQGGCSANDTLPLNVVREAWLAA
VDEPNLQQRFLSGRVNFCTLMPMRAIPFRLICLLGMNDGDYPRSQYPHGFDLMSQRGQYR
PGDRSRRQDDQYLFLEALLSARQQLYLSWIGRSIRDNSERPPSLLIAQLRDFLQQSFCLP
DGRKLLEALTLEHPLQPFSPDYIKSGRDSRLFSYAREWFQQAPETMSASNDTVNSEEKVY
NLTLETLARFLKAPVQTFCRHSLKFSFDSEDVTSEDNEPFGFDRLRAHIHSKELLEALQN
RQPADLDGFFQQQMTALSAQGALPLGGFAQTAFAGIAVPADRAWRQYQVLLEHWPLEMPA
RQVELAFGVAEGITVQLAAGLNHLRRAANSDTCALLSLSAQSLLKKDRIQYHNLILPWLQ
HLAACADGLPVQSFIAAADGIVTIQLLPQHEALAHLQTLLAAWRHGMQTPLPVACRTAFA
WLNAEEENARDTARAQYDGDDWNPGEVDFDAYLGRFFPNFDSLYQTETADFEHWATTLYE
PLYRHLKPLQAD
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgagccataacctggacagcggcatcgccgtcattcattccaaccaactggaggccttg
cgggatgtggtggaatattggctgcgccaacacccgttggcaccgttggaaaatgaagta
ttgctggtgcaaagcaacggcatgggccaatggctgaagcaaagtctggcgcaaaacaac
gccctgggcattgccgcggccatgcaaatccaattgccgtccctgttcatctggagcgtc
taccgggcggtattggggcagcaaattcccaaggagcagccgctggccaaggcgccgctg
acttggcgcctttaccgcttgctgccggtgctgattacgcaaaccggcttcgaaagtctc
gcgtattttctacagcacgattgcaacggccgcaagcgcttccaattggccgagcagctg
gccgacctgttcgatcaatatcaggtataccgttccgactggataaacgactgggccgcc
ggccgggatattttccgcgatgcgcatggccaaccgctgccgctgcccgagcggcaaatc
tggcaatctcatctgtggcgggcggtattggccgatttgggcggcgactgcaacccgttc
gccagccgggcctctgtgcatgcccaattcatggccaccgtcgacacactggagcaacgc
ccggccggcatcccacgccgcatcatgttattcggcctgtcgtcgctgccgcaacaatcg
ttggaagtactggcaaaattgggcacgttttgtcagatcgttttgttcgtccacaacccg
tgccagcattactgggcagacatcatcgaagacaaggaactgttaaaagcccagcgtaaa
cggcaatcgtacaaagccggcatggccgccggattgaccccggaggaactgcatttgcat
gccaacccgctgttggcggcctggggcaagcaggggcgcgactatatccgcttgctggac
catttcgacgaaacccgggcctatgccggctggcactggccggagcagaaaatcgattta
ttccaggattacggcgacgacggccaacgcagtttattgcaacggctgcagcaaagcatc
ctggacctggagcccgtgccggaacaaccgctgttactggacaaagccgacgactcacta
gcctttcatatcgctcacagtccgcagcgggaagtggaaatactgcacgaccaattgctg
gcccgcttcaatgccgcggaacaggccggcgataaactgcatccgcgcgacatcatcgtc
atggtgccggacattaatctatacgcgccgcatatccgcgccgtcttcggccaggtgcag
gccgaagacccgcgctatattcccttcagtctggccgatcagcaacaacgcggggaaaac
ccgctgctggtcgccgtggaaacgctgttgaatctgccggaatcgcgtttcaacgtcagc
gaatttttgggcctgctggaagtgccatccttacggctgcgcttcggcctggacgaaacc
gccatccccaaaatccaccaatggctggaacaagccggtatccgctggggtctgaacgcc
gaacaacggacccgcgcggtggacatgccggccgattttgccgccaacacctggcaattc
ggtttacgccgcatgctgctgggttatgcggtgggcgccggggacgccttcaacggcatc
gagccctacccggaaatcggcggtttggacgcgcaatggctgggccatttatgccacata
ttggatacgctggaacgttacgccgacagtctcggccgtgaactgcacgccgaggcctgg
ctgcaagtactaacccaattgctggacgatttttttgtagcggacaacgagcgcgaccgt
aaaaccttggacacactgacagtcgccttggacaaatggcatcaagcctgtctgcaagga
ggctgtagcgcaaacgataccctgccgctcaatgtggtgcgcgaagcctggctggcggca
gtggacgaaccgaacctgcaacaacgcttcctgagcggccgggtgaacttctgcaccctg
atgccgatgcgggccatcccgttccgcttgatttgcctgctgggcatgaacgacggcgat
tacccgcgcagtcaatacccgcacggtttcgacttgatgagccagcgcggccaataccgg
cccggcgaccgctcgcggcggcaggacgatcaatacctgtttctggaagcgctgctctcg
gccagacagcagctttacctcagctggataggccgcagcatccgcgataacagcgaacgg
cctccctcgttgttgatcgcccaattgcgcgattttctgcaacagagcttttgtttgccg
gatgggcgcaaactgctggaagcgctgacgctggaacacccgttgcagcccttcagcccg
gactatattaaatccggccgagactcgcgcctgttcagctatgcccgggaatggtttcaa
caagcgccggagaccatgtcggcttccaacgacaccgtcaatagtgaggaaaaagtctac
aacctgacgctggaaaccctggcgcgtttccttaaagcaccggtgcaaaccttttgccgg
cacagcctgaaattcagcttcgacagcgaggacgtcaccagcgaagataacgaacccttc
ggtttcgaccgcttgcgagcgcatattcatagcaaggaactgctggaggctttgcaaaac
cgacaaccggccgacctggacggttttttccagcagcaaatgaccgccttaagcgcgcaa
ggcgccctgcccctgggcggctttgcccaaaccgcgttcgccggcatcgccgttcccgcc
gacagggcctggcgccaataccaagtgttacttgaacactggccgctggaaatgccggcc
cggcaagtcgagctggcgtttggcgttgcggagggcataacggtgcaactcgctgccggc
ctcaaccatctacgccgcgccgctaatagcgacacatgcgctttgctcagcctgtcggcg
caatccctgcttaaaaaagaccggattcaataccacaacctgatcctgccctggctgcag
catctggccgcctgcgccgacggcctgccggtgcagagctttatcgccgccgcggacggc
atcgtcaccattcaactgctgccgcaacacgaagcattggcacatctgcagaccttgctg
gcagcgtggcgacacggcatgcagaccccgctgccggtggcttgccgcacggcgtttgcc
tggctgaatgcagaggaggaaaacgcccgggacaccgcgcgagcgcaatacgacggcgac
gactggaaccccggcgaagtcgatttcgacgcctatctgggacggtttttccccaacttc
gacagcctgtatcaaacggaaaccgcggatttcgaacactgggccaccacactgtacgaa
ccgctttatcgccatctcaagccgctgcaggcggattga
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