Methylomonas methanica: Metme_1501
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Entry
Metme_1501 CDS
T01511
Name
(GenBank) (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
mmt
Methylomonas methanica
Brite
KEGG Orthology (KO) [BR:
mmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmt03016
]
Metme_1501
Enzymes [BR:
mmt01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Metme_1501
Transfer RNA biogenesis [BR:
mmt03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Metme_1501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
AEF99923
UniProt:
F9ZZV5
LinkDB
All DBs
Position
1640620..1641996
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AA seq
458 aa
AA seq
DB search
MAQKLYIQTNGCQMNEYDSDKMRDVLLASHGLELTDIPEQADVLLLNTCSIREKAQEKVF
SAVGRWKKIKDKRPEVIIGVGGCVASQEGAAIQKRAPYVDIVFGPQTLHRLPELLNKARN
GDSHVVDISFPEIEKFDNLPEPRAEGPKAFVSVMEGCSKYCTYCVVPYTRGEEVSRPLKH
VIAEIETLAAQGVREINLLGQNVNAYRGEMEDGDIASFALLLHFVAAVEGIDRIRFTTSH
PLEFTDDIIDAFAEIPQLVNHLHLPVQSGSNRILAEMKRGHAREDYLEIMRKIKAARPGI
SLSSDFIIGFPGETEQDFEDTMALIEEVGFDFSYSFIFSARPGTPAANYPDDVSMDVKER
RLQRLKTRLNEMFLAISESMIGSVQSVLVEGVSKKNPLHLTGRTENNRVVNFAAHPRLIG
QFVDVLITEALPNSLRGRLVESSVEKIMQNTQDIKVAC
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaaaactttatatacaaactaacggttgtcagatgaacgagtacgattccgat
aaaatgcgggatgtactactggcttcgcacggcttggaattgacggacatcccggaacaa
gccgatgttttattgttaaacacttgttcgattcgcgaaaaagcgcaggaaaaagtattt
tccgcggtcggacgctggaaaaaaatcaaagacaaacgccccgaagtgatcatcggggtc
ggcggttgcgtggccagtcaggaaggggcggcgattcaaaagcgcgcgccttatgtcgac
atcgtttttggccctcaaacgctgcatcgcttgccggaattattaaacaaagcccgtaat
ggcgattcacatgtcgtggatatttcgtttccggaaatcgaaaaattcgacaatttgccc
gagccgcgcgccgaaggtcccaaggcctttgtgtccgttatggaaggttgcagcaagtat
tgtacctattgcgtagtgccgtatacacgcggcgaagaagtcagtcggcccttgaaacac
gtgattgccgagatcgaaaccctggcagcgcaaggtgtgcgggaaatcaacctgctgggg
caaaatgtcaatgcttatcgcggcgaaatggaagacggcgatatcgccagctttgcgttg
ctgttgcatttcgtcgccgctgtcgaggggatcgaccgtattcgcttcacgacctcgcat
cctctggaatttaccgacgatatcatcgacgcgtttgctgaaattccgcaactggtgaat
catttgcatttgccggtacaaagcggcagcaaccggatactggccgaaatgaaacgaggc
catgcgcgcgaagactatctggaaattatgcgcaaaatcaaggcggcgcgtccgggtatc
agcctgtcgtccgattttatcatcggctttccgggcgaaaccgaacaggattttgaggac
accatggctttgattgaagaagtgggcttcgatttttcctacagcttcattttcagcgcc
agacccggcacgccggcggcaaattatcccgatgatgtcagcatggacgttaaggaacgg
cgtttgcaacgcttgaaaacgcgcttgaacgaaatgttcctggctatttcggaatccatg
attggctcggtgcaaagcgtactggtcgaaggcgtttccaagaaaaacccgttgcatctg
actggacgcaccgaaaacaatcgggtagtcaattttgccgcccatccgcgtttgatcggc
caatttgtcgatgtactgattaccgaagcattgccaaattcgctccgtggtcggctggtg
gaatcctctgtcgaaaaaattatgcaaaatacccaggacataaaggtcgcgtgttga
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