Methylomonas methanica: Metme_1884
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Entry
Metme_1884 CDS
T01511
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
mmt
Methylomonas methanica
Brite
KEGG Orthology (KO) [BR:
mmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmt03032
]
Metme_1884
03036 Chromosome and associated proteins [BR:
mmt03036
]
Metme_1884
03400 DNA repair and recombination proteins [BR:
mmt03400
]
Metme_1884
DNA replication proteins [BR:
mmt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Metme_1884
Chromosome and associated proteins [BR:
mmt03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Metme_1884
DNA repair and recombination proteins [BR:
mmt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Metme_1884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
TetR_C_30
Motif
Other DBs
NCBI-ProteinID:
AEG00300
UniProt:
G0A484
LinkDB
All DBs
Position
2063918..2064223
Genome browser
AA seq
101 aa
AA seq
DB search
MTKSELIEVLARKQPHLPLKDVELAVRCVVDHLSDTLASGERIEIRGFGSFSLHHRSARL
GRNPKTGESVSLTEKHVPHFKPGKELRDIVDASREKFKIVD
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaaatcagaattgatagaggtgttggcacgtaaacagccacatcttccgcttaaa
gatgttgagttggcagtcagatgcgtagtcgatcatttgagcgacacactagcaagtgga
gagcgtatcgaaattcgcgggtttggtagcttttccttgcatcatcgctcggcgcgattg
ggcaggaatccaaaaaccggcgagtcggtatctctaaccgaaaagcatgtgccgcatttt
aaacctggaaaagaattgcgcgacattgttgatgcatccagggaaaagtttaaaatcgtc
gactaa
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