Methylomonas methanica: Metme_2637
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Entry
Metme_2637 CDS
T01511
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mmt
Methylomonas methanica
Pathway
mmt03030
DNA replication
mmt03430
Mismatch repair
mmt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Metme_2637
03430 Mismatch repair
Metme_2637
03440 Homologous recombination
Metme_2637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmt03032
]
Metme_2637
03400 DNA repair and recombination proteins [BR:
mmt03400
]
Metme_2637
Enzymes [BR:
mmt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Metme_2637
DNA replication proteins [BR:
mmt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Metme_2637
DNA repair and recombination proteins [BR:
mmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Metme_2637
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AEG01023
UniProt:
F9ZYB8
LinkDB
All DBs
Position
complement(2907532..2911023)
Genome browser
AA seq
1163 aa
AA seq
DB search
MNPGFIHLRIHSEFSLVDGIVRIKPLIKKLAEYAMPAAAITEQSNLFSLVKFYKAAQGAG
IKPLIGADVWVLNPDEPAAPHRLTLLARNKLGYVTLTELISQGYQQGQHQGVPMLQKDWL
EQNRQGLIVLSGAMEGDIGQALLAENTQQANRCAEYWRDLFPDSFYLELQRVGKAEEERY
IKLAVELATEFDLPVVATNDVRFISKTDFDAHEVRVCIHQGRVLDDSRRPKNYTNQQYLR
TAEEMAELFADIPEALENSVAIAQRCNVELTLGENYLPDFPVPAGMTLDDYFKHASRQGL
EERLLQHAPVGAGSFEENRKVYDERLEVELGVIVQMGFPGYFMIVADFIQWAKNNAIPVG
PGRGSGAGSLVAYALKITDLDPIEFDLLFERFLNPERVSMPDFDIDFCMERRDEVIDYVA
GHYGRDHVSQIITYGSMAAKAVIRDVGRVMGHAYGFVDRLAKLIPFEIGMTLEKALKESP
ELKALYDTEEEVKALIDMARSLEGISRNAGKHAGGVVISPTKLTDFAPLYCEAGGGNLVT
QFDKDDVEAVGLVKFDFLGLRTLTIIDWALQTINRQRAQRGESPIDISQIPRDDLPSYEL
LKNAQTTAVFQLESRGMKELIKKLKPDCFDDIIALVALFRPGPLESGMVDDYINVKHGAK
AEYAHPLLEPILKPTNGVILYQEQVMQIARELAMYTLGGADMLRRAMGKKKPEEMAKERE
KFMSGSVANQIDEGIATYVFDLMEKFAGYGFNKSHSAAYALVAYQTAWLKAHYPAAFMAA
VMSSDMDNTDKVVVLIDECREMKLEICPPDINVSNYQFTVNDKGQIVYGIGAIKGVGENA
IDDLIKERNANGPYAGLYDLCKRVDLRKVNRRVLEALIRAGALDAIEPNRAAHLAELTTA
LRVAEQHGKMALAGQNDLFGLGAAETDDGEAEAYANLVEPWTEKEKLEAEKQTLGLFLTG
HPIAEYLPELKHITHGTLGSLEADAGRIKGKMEARVAGLIVEMRTRQTKQGKMMGFATLD
DRTGRLEVAAFSGIYDKYRDLLSKDTLLVAEGSLSMDDYTNSLRMTAEKLYSMEEAREMF
ARGIVLDWDVSQWPRSRAFVEELKQILMPFRGGECPVAIEYVAATAKSTVQLGDEWRVRP
SDELLIRLRRLLSLEAVSVKYRN
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccggtttcatccatctcaggatacatagcgaattttcgttggtcgacggtatt
gtcagaattaaaccgttgatcaaaaaactggccgaatatgcgatgccggcagcggctatt
accgaacaaagtaatctgttttcgctagtcaaattttataaagccgcccaaggtgccggc
atcaaacctttgataggcgcggatgtctgggtgcttaacccggatgagccggccgcaccg
caccgcctgactttattggcccgcaacaaactcggttacgtcacgctgaccgaattgatc
tcccaaggttatcagcaaggtcagcatcaaggcgttcccatgctgcaaaaagactggctg
gagcaaaaccgccaaggtttgattgtgctgtcgggggctatggaaggcgacatcggtcag
gcattgttggccgaaaacactcagcaggcaaaccggtgtgccgaatattggcgggattta
tttcccgacagcttttatctggaactgcaacgagttggtaaagcggaggaagagcgttac
atcaaactggcggttgagctggcgacggaatttgacttgccggtggtggccactaacgat
gtgcgttttatcagcaaaaccgatttcgatgcccatgaagtcagggtttgcattcaccaa
ggtcgggtattggacgatagccggcggccaaaaaattacaccaaccagcaatatttgcgt
acggccgaagaaatggccgaactgtttgccgatattcctgaggcattggaaaattccgtc
gccatcgcccagcgttgtaatgtcgaactgaccttgggtgaaaactacctgccggacttc
ccggtgcccgctgggatgacgctggacgattattttaaacacgcctcgcgacaaggtctg
gaagaacgcttgttgcaacatgcgccggttggcgccggtagtttcgaggaaaaccgcaag
gtttacgatgagcgtctggaagtcgagctgggcgtgattgtgcagatgggttttcccggc
tatttcatgatcgtggcggattttattcaatgggctaaaaacaatgccattccggtgggg
cctgggcggggctccggggcaggctccctggtggcatacgcattgaaaattaccgacttg
gacccgatcgaattcgatttgttgttcgagcggtttctaaatccggagcgggtttcgatg
ccggatttcgatatcgacttttgcatggagcgccgcgacgaggtgatcgattatgtggcg
ggccattacggccgcgatcacgtctcgcagatcatcacctacggttccatggccgccaag
gcggtcattcgcgatgtgggccgggtgatgggtcacgcctacggtttcgtcgatcggttg
gctaagctgattccgtttgagattggcatgacgctggaaaaggccctgaaggaaagtccc
gagctcaaggccttgtacgatacggaggaagaggttaaagccctgatcgacatggcgcgt
tccctggaaggcatttcccgtaacgccggcaaacacgccggcggcgtggtgatttcgccg
accaagttgaccgatttcgcgccactttactgcgaggcgggcggcggtaatctggtcact
caattcgacaaggacgacgtggaagcggtcggcttggtcaagttcgactttttaggcttg
cggacgctgaccattatcgactgggctctgcaaaccatcaaccgccagcgcgcgcaacgg
ggcgaatcgccgatagacatcagccagattccgcgcgacgacctgcccagttacgaattg
ctgaagaacgcccaaaccactgccgttttccagcttgaatcgcgcggcatgaaggagttg
atcaaaaagcttaagccggactgtttcgacgatatcatcgcgttggtggctttgtttcgg
cccgggccgttggaatcgggcatggtggacgattacatcaacgtcaagcacggcgccaag
gccgaatatgcccatccgctgctggaacctatactgaaaccgaccaacggcgttatcctg
tatcaggaacaggtgatgcagattgcccgtgaattggcgatgtataccctgggtggcgcc
gatatgctgcgacgggccatgggtaagaaaaagccggaggaaatggccaaggaacgggaa
aaattcatgtcgggttcggtggctaaccagattgacgaaggtatcgccacctacgtattc
gacttgatggaaaagtttgccggttacgggttcaacaaatcgcattcggcggcttatgcg
ctggtggcctaccaaaccgcgtggctgaaagcacattacccggcggcttttatggcggcg
gtgatgtcgtcggatatggataacaccgacaaggtggtggtgttgatcgacgaatgccgg
gaaatgaagttggagatatgtccgccggacatcaacgtctccaattatcaatttaccgtc
aacgacaaaggtcaaatcgtttacggcatcggcgccatcaagggggtcggcgagaacgcg
attgacgatttaatcaaagagcgcaacgccaatggaccgtatgccggcctgtacgatttg
tgcaaacgggtggatttgcgcaaggtaaaccggcgggtattggaagcgttgatcagggcc
ggagccttggatgctatcgagcccaaccgagccgcgcatttagctgaattgactaccgcg
ctgcgggtggccgagcagcacggcaagatggcgctggcgggtcagaacgacttgtttggt
ttgggcgcggccgaaaccgatgacggtgaagcggaagcctatgccaacctggttgagcct
tggacggaaaaagaaaagctggaagcggaaaaacagaccctgggcctgtttctgaccggt
catcccatcgcggaatatctgccggaattgaaacacattacccatggcaccttgggtagt
ctggaagcagatgccggacgcatcaaaggcaaaatggaagcacgagtggccggtctgatc
gtggaaatgcgtacccggcagactaaacaaggcaaaatgatggggtttgccacgctggac
gaccgcaccggccgtttggaagtagccgctttcagcggtatttacgataaataccgggat
ttactgtccaaggacaccttgttagtggcggaaggctcgttaagcatggatgactatacc
aacagcctgcgcatgacggcggaaaagctttacagtatggaagaggcgagggaaatgttt
gcccgcggtatcgtgttggattgggatgtctcgcaatggcctcggtcgcgagcgtttgta
gaggaactgaagcaaatattaatgccgttccgtggcggcgaatgtcctgtcgccattgaa
tatgtcgcggcaaccgccaagtcgaccgtacaactgggcgacgaatggcgggtgcggccg
agtgacgaattgttgatccgcctccgcaggttattatcgctggaggccgtgtcggtcaag
tatagaaattga
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