Methylomonas methanica: Metme_3494
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Entry
Metme_3494 CDS
T01511
Name
(GenBank) Uracil-DNA glycosylase superfamily
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mmt
Methylomonas methanica
Pathway
mmt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Metme_3494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmt03400
]
Metme_3494
Enzymes [BR:
mmt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Metme_3494
DNA repair and recombination proteins [BR:
mmt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Metme_3494
Prokaryotic type
Metme_3494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEG01861
UniProt:
G0A7L8
LinkDB
All DBs
Position
complement(3858209..3858856)
Genome browser
AA seq
215 aa
AA seq
DB search
MAGAGQRNMGMSVREQAIREHRAAMLNCSKCSAMVGPVVSGSPVLSPIVLIGQAPGEREG
QFGKPFAWTAGKTLFGWFESIGIGEQQFRSRVYMAAVCRCFPGKNANGGDRVPSLEEISN
CAGWLKAEVDLLKPALILPVGKLAIAQLMPVQKLTDVIGKRHSVDFHGHHCEAIPLPHPS
GASTWHRTEPGRSLLAAALRLLAAHSAWRSLKNEC
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggccggtgccggacagcgaaatatgggtatgtctgtacgtgaacaagcaatacgcgaa
caccgcgcggcaatgctaaattgcagcaagtgctcggctatggtcgggccggtagtgagc
ggcagtccggtactttcgccgatagtgttgatcggccaagcgcctggcgaaagggagggg
cagttcggcaagccgtttgcctggacggccggcaagactttgttcggatggttcgaaagc
atcggaatcggcgaacaacagtttcgttcccgcgtgtatatggcggctgtgtgccgatgt
tttccggggaaaaacgccaacggcggcgaccgcgtgccgagtcttgaggaaatcagtaat
tgtgccggctggctcaaggctgaagtcgatttgctcaagccggccttgattttgccggtc
ggcaagctggcgattgcgcaattaatgccggtacaaaagctaaccgacgttatcggcaaa
cggcattcggtcgattttcacggccaccattgcgaggctatacccttgccgcatccttcc
ggcgcatcgacctggcatcgtaccgaaccgggacgcagtttgctggcggcggctttgcgg
ttattggcggcgcattcggcttggcggtcgcttaagaatgagtgttag
DBGET
integrated database retrieval system
