Entry |
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Name |
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KO |
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Organism |
mmt Methylomonas methanica
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Brite |
KEGG Orthology (KO) [BR:mmt00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:mmt03016]
Metme_3747
Enzymes [BR:mmt01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Metme_3747
Transfer RNA biogenesis [BR:mmt03016]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Metme_3747
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
4166088..4167245
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AA seq |
385 aa
MTIQYIDRPEQLPLLCEHIQQEPWIALDTEFLREKTYYPKFCLLQIAAPGWVACVDPLAI
DDLSPLFDVIYNPEIVKVLHSCRQDLEIFFQITGRIPGPIFDTQIAAPLLGFQENPGYAM
LVSSFLNINLSKAHTRTDWTQRPLSEDQIQYAADDVIYLCKIYTTMCEQLEKLGRLDWLE
SDFALLNNAELYQLSPENAWLKIRGKNKLTGRQLSILQSLSEWREQTAQTENKPRNWLFP
DDMLLELAKLQPVTLADLGKIRNINERSVNRYGKTLCELIDVARQRPPKPLTEKDRAGKK
TQQHEAVMDVLSAVVRIRAEQNSLNPVILATRKELEQLVFGDPDCPLLHGWRYNMAGQEL
QGLLQGQYSLSLTPDSVAITPVSAQ |
NT seq |
1158 nt +upstreamnt +downstreamnt
atgactattcaatacatcgaccgccccgaacaactgccccttttatgcgaacacattcaa
caagaaccctggattgcgctcgacaccgaattcctccgcgaaaaaacctattatcctaag
ttttgtttgctgcaaattgccgcgcccggctgggttgcctgcgtcgaccccttggccatc
gacgatctgtccccgctattcgacgtgatctacaatcctgaaatcgttaaagttctacat
tcgtgccgccaggatctggaaatttttttccaaatcaccggccgcatacccggccctatt
ttcgacacccaaatagcggcgcccttgctgggttttcaggaaaatccaggctatgccatg
ctggtttccagttttttgaatatcaatctcagcaaagcccacacccgtaccgactggacg
caacgtccgttgagcgaagaccagattcaatacgcggccgacgacgtcatctatttgtgc
aagatttacacgacgatgtgcgaacaactggaaaaactgggccgcctggactggctggaa
agcgactttgcgctgctgaacaatgccgagctgtaccaactgtctccggaaaatgcctgg
ctgaaaatccgcggcaaaaacaagctcaccgggcggcagctgtctattctccaaagcttg
agcgaatggcgggaacagacagcccagaccgaaaacaagccgcgcaattggttgtttccg
gacgatatgctgctggaactggccaagctgcaacccgtcacgttggcggatttgggcaaa
atcagaaacatcaacgagcgtagcgtcaaccgttacggcaaaaccctatgcgagctaatc
gacgtcgcccgtcaacgcccacccaaacctttgaccgagaaagacagggccggtaaaaaa
acccaacagcatgaagctgttatggatgtattgagtgccgtcgtgcgtatccgcgccgaa
caaaactcgcttaatccggtgatactggctacccgcaaggaactggaacaactggttttt
ggcgaccctgactgtccgctgctgcacggctggcgttataacatggcgggacaagaactg
cagggtttgctgcaaggacaatacagtcttagcctgacgcccgattcggtggcgattacg
ccggttagcgcgcaataa |