KEGG   Methylomonas methanica: Metme_3747
Entry
Metme_3747        CDS       T01511                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
mmt  Methylomonas methanica
Brite
KEGG Orthology (KO) [BR:mmt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mmt03016]
    Metme_3747
Enzymes [BR:mmt01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     Metme_3747
Transfer RNA biogenesis [BR:mmt03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Metme_3747
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC
Other DBs
NCBI-ProteinID: AEG02105
UniProt: F9ZWU3
LinkDB
Position
4166088..4167245
AA seq 385 aa
MTIQYIDRPEQLPLLCEHIQQEPWIALDTEFLREKTYYPKFCLLQIAAPGWVACVDPLAI
DDLSPLFDVIYNPEIVKVLHSCRQDLEIFFQITGRIPGPIFDTQIAAPLLGFQENPGYAM
LVSSFLNINLSKAHTRTDWTQRPLSEDQIQYAADDVIYLCKIYTTMCEQLEKLGRLDWLE
SDFALLNNAELYQLSPENAWLKIRGKNKLTGRQLSILQSLSEWREQTAQTENKPRNWLFP
DDMLLELAKLQPVTLADLGKIRNINERSVNRYGKTLCELIDVARQRPPKPLTEKDRAGKK
TQQHEAVMDVLSAVVRIRAEQNSLNPVILATRKELEQLVFGDPDCPLLHGWRYNMAGQEL
QGLLQGQYSLSLTPDSVAITPVSAQ
NT seq 1158 nt   +upstreamnt  +downstreamnt
atgactattcaatacatcgaccgccccgaacaactgccccttttatgcgaacacattcaa
caagaaccctggattgcgctcgacaccgaattcctccgcgaaaaaacctattatcctaag
ttttgtttgctgcaaattgccgcgcccggctgggttgcctgcgtcgaccccttggccatc
gacgatctgtccccgctattcgacgtgatctacaatcctgaaatcgttaaagttctacat
tcgtgccgccaggatctggaaatttttttccaaatcaccggccgcatacccggccctatt
ttcgacacccaaatagcggcgcccttgctgggttttcaggaaaatccaggctatgccatg
ctggtttccagttttttgaatatcaatctcagcaaagcccacacccgtaccgactggacg
caacgtccgttgagcgaagaccagattcaatacgcggccgacgacgtcatctatttgtgc
aagatttacacgacgatgtgcgaacaactggaaaaactgggccgcctggactggctggaa
agcgactttgcgctgctgaacaatgccgagctgtaccaactgtctccggaaaatgcctgg
ctgaaaatccgcggcaaaaacaagctcaccgggcggcagctgtctattctccaaagcttg
agcgaatggcgggaacagacagcccagaccgaaaacaagccgcgcaattggttgtttccg
gacgatatgctgctggaactggccaagctgcaacccgtcacgttggcggatttgggcaaa
atcagaaacatcaacgagcgtagcgtcaaccgttacggcaaaaccctatgcgagctaatc
gacgtcgcccgtcaacgcccacccaaacctttgaccgagaaagacagggccggtaaaaaa
acccaacagcatgaagctgttatggatgtattgagtgccgtcgtgcgtatccgcgccgaa
caaaactcgcttaatccggtgatactggctacccgcaaggaactggaacaactggttttt
ggcgaccctgactgtccgctgctgcacggctggcgttataacatggcgggacaagaactg
cagggtttgctgcaaggacaatacagtcttagcctgacgcccgattcggtggcgattacg
ccggttagcgcgcaataa

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