Methylomonas methanica: Metme_3791
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Entry
Metme_3791 CDS
T01511
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mmt
Methylomonas methanica
Pathway
mmt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Metme_3791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmt03021
]
Metme_3791
03400 DNA repair and recombination proteins [BR:
mmt03400
]
Metme_3791
Enzymes [BR:
mmt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Metme_3791
Transcription machinery [BR:
mmt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Metme_3791
DNA repair and recombination proteins [BR:
mmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Metme_3791
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AEG02146
UniProt:
F9ZWY4
LinkDB
All DBs
Position
complement(4214331..4215338)
Genome browser
AA seq
335 aa
AA seq
DB search
MQSSIAGLLKPKLVEVVSHTANHSRIVIEPLERGYGHSLGNALRRVMLSSIPGCAVTEVS
IAGVLHEYTTIEGVQEDVIDILLNLKKLSVILHGKDEVTLTLSKSGIGSVTAADIEVTSS
VEIINPGLVIANLTQDKQLDIKIKIERGRGYIPAAVRKEQMDDTPVGVLMVDAAFSPIVK
VAYHVETTRVEQRTNLDKLVVELETNGTVDPEAVIKLAASILHDQLSVFVDFEKVKEQMP
EENVVEEEAFDPILLRPVDDLELTVRSANCLKAENIFYIGDLIQRTEVELLRTPNLGKKS
LTEIKDILAIKGLSLGMRLENWPPENLVDQSQIGI
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcagagttctattgcgggtttgttaaagccaaaattagttgaagtagttagccataca
gcaaaccattcaagaatcgtcattgagcccctagagcgtggctatggtcactcattaggt
aacgctcttcgtagagttatgctgtcctcaatacctggttgtgctgttacggaagtttcg
atagccggcgtcttgcatgagtacacgactattgaaggtgttcaggaagatgttatcgac
atcctgttgaatctaaaaaaactatctgtcattttgcatggtaaagatgaagttacgttg
accttatcaaagtctggaataggtagtgttactgctgcggacattgaagtcactagcagt
gtcgaaattatcaatccaggccttgttatcgcgaatcttacccaagataagcagctcgac
atcaaaatcaagatcgagcgtggtcgtggatatattcccgctgcagtgagaaaagaacag
atggatgacactccggtaggtgttttaatggtagatgccgcgttcagcccaattgttaaa
gtagcgtatcacgttgaaaccactcgcgttgagcaaagaaccaacctcgataagcttgtt
gtcgagcttgagacgaacggtactgttgatcccgaagcggtaataaagttagcggcttcc
atactgcatgatcaactatcagtctttgttgattttgagaaagtcaaggagcaaatgcct
gaagaaaatgtggttgaggaagaggctttcgatcctatcttgttaagaccggttgacgat
cttgagttgacagtgcgttcggctaattgccttaaagcggagaatattttctacatcggc
gatttgattcaaaggactgaagtggagttattacgaacacccaatttaggaaagaaatct
cttactgaaattaaagatatacttgctataaaaggcttgtctttgggtatgaggcttgaa
aactggccaccagaaaatctggtagatcaatcccaaatcggtatataa
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