| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
mmt Methylomonas methanica
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:mmt00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Metme_3822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:mmt03021]
Metme_3822
03400 DNA repair and recombination proteins [BR:mmt03400]
Metme_3822
Enzymes [BR:mmt01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Metme_3822
Transcription machinery [BR:mmt03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Metme_3822
DNA repair and recombination proteins [BR:mmt03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Metme_3822
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(4231687..4235910)
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| AA seq |
1407 aa
MNFLKRQGRTDDFDTIRIGLASPDMIRSWSYGEVKKPETINYRTFKPERDGLFCAKIFGP
ISDYECLCGKYKRLKHRGVICEKCGVEVTLSKVRRERMGHIELASPVAHIWFLKSLPSRI
ALLLDMTLRSIERVLYFETFVVTDPGMSPLERGQLLTDEEYLNAVEEHGDDFVAKMGAEA
VFDLLKSIDLKEEINTLREEINSTSSDTKIKKFSKRLKVIDSLLASNNRPEWMIMQVLPV
LPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLTRLLDLNAPDIIVRNEKRMLQEAVD
ALLDNGRRGRAITGSNRRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPTLRLH
QCGLPKKMALELFKPFIFSKLQLRGLATTIKAAKKMVEREGAEVWDILEEVIREHPVLLN
RAPTLHRLGIQAFEPTLIEGKAIQLHPLVCSAFNADFDGDQMAVHIPLSIEAQLEARTLM
MATNNILSPANGEPVINPSQDVVLGLYYISREKINARGEGSIFTDSAEMMKALDSKAVEL
QSKIEIRVTEKIKNAAGEFEAITSRKKTTVGRAIIWDIVPDGMPYELVNVDMTKKNISRL
INYSYRYLGIKETVILADQIMYLGFRYATRSGVSFGIEDMEIPAKKADIIRSAGAEVNEI
QNQYSSGLVTDGERYNKVVDIWSRANDQVAKVMMEGLGEDLVLDESGAVLKDANGKSVTQ
KSFNSIFMMAESGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLDVLQYFIST
HGARKGLADTALKTANSGYLTRRLVDVAQDLVIAETDCGTENGLTMMPIIEGGDVVEPLV
ERVLGRVAAIDVTEQASDKVLIPAGTMIDENLVSVLEENGIDKMLVRSVITCESRQGVCA
KCYGRDLGRGHLVNIGEAVGVVAAQSIGEPGTQLTMRTFHIGGAASRSAAVSNVQVKSVG
SVKLNNMKTVKNRENNLVAVSRSGEVGVMDDYGRERERYKIPYGAVLSIEDGSAVKAGDI
IVNWDPHTHPVITEVDGFIQLHDFIDGVTVQEQSDEVTGLTSRVVTDPKQRSSAGKELRP
MVRLIDEHGGLINLPGTDIPAQYFLPAGAIVGVKDGGEVRVGDVLARIPQESSKTRDITG
GLPRVADLFEARKTKDPAILAEATGMVSFGKETKGKQRVIITDAEGEQYETLIPKWRHIT
VFEGEFVEKGETIAEGELTPHDILRLRGIEELADYLVKEIQDVYRLQGVKINDKHIEAII
RQMLRKVEITASGETDFVKGEQVERSLMNAVNDQAEREGKIPASYESMLLGITKASLATE
SFISAASFQETTRVLTDAAVRGISDSLNGLKENVIVGRLIPAGTGLAYHEQRRKRRSIEA
SNESDSAISAVEAVDVEEALKQALNIE |
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| NT seq |
4224 nt +upstreamnt +downstreamnt
atgaatttcttaaagcgtcagggtcgcaccgatgattttgacactatccggattggcttg
gcttcgccggacatgattcgttcatggtcttacggcgaggtcaaaaagcccgagaccatc
aactaccgtacgttcaagccggaaagagacggcttgttttgcgccaaaatttttggaccg
attagcgattacgagtgcttgtgcggaaaatataagcgcttaaagcatagaggcgtcatt
tgtgaaaagtgcggcgtcgaagtcaccctatccaaggttcgccgggaaagaatgggccat
atcgaactggcgagtccggttgcgcacatatggtttttgaaatcgctgccgtccaggatc
gcgctgttattggatatgacgctacgttctatcgagcgtgtgctgtatttcgaaacattc
gtggttaccgatcccggtatgtcgcctttggaaagagggcaattgctgacggacgaagag
tatctgaacgcggttgaagaacatggtgacgatttcgtggccaaaatgggtgccgaagca
gtcttcgatttgttgaagtcgatagatctgaaagaagaaatcaatacactgcgggaagaa
atcaattcgaccagctccgataccaagattaaaaagttttccaagcgcctgaaagttatt
gattcgctgttagcgtccaataaccgtccggaatggatgattatgcaggtgctaccagta
ctgccgcccgagttgcgccctctggtaccgctggatggtggccgttttgccacgtccgat
ctgaacgatttatatcgccgagtcattaacagaaacaatcgtctgaccagactgttggat
ctgaatgcgccggacattatcgtccgcaacgaaaagcgcatgctgcaggaagctgtcgat
gcgttgttggataatggccgtcgcggtcgtgcaattaccggcagcaatagacgccctctg
aaatccttggctgatatgatcaagggtaagcaaggccgtttccgtcaaaatctattaggc
aagcgggtcgattattcgggccgttcggtcatcgttgtggggccgacattaaggcttcat
caatgcggattgccgaaaaaaatggcgttggaattgtttaagcctttcatattcagcaag
ttgcagttgcgcggtctggcaaccaccattaaagccgccaaaaaaatggtagagcgtgaa
ggtgcggaagtttgggatattctggaagaagtgattcgtgagcatcctgtattgctgaac
cgcgcccctactctgcatagattgggtattcaggcgtttgagccgaccttgatcgaaggc
aaagccattcagttgcatcctttggtctgtagcgcgtttaacgcggatttcgacggtgac
cagatggctgtgcatattccgttgtccattgaggcacaactggaagcgcgtacgctgatg
atggcgaccaacaatatattgtcacccgccaacggcgagcctgttatcaatccttcccaa
gacgtcgtcttggggttgtactacatcagccgggaaaaaattaacgccagaggcgaaggc
agcatctttaccgattccgccgagatgatgaaagcgttggacagtaaagccgttgagctg
cagagcaaaattgaaattcgcgttaccgaaaaaattaaaaatgccgccggtgaatttgaa
gcgattaccagtagaaagaaaaccacggttggcagagcgataatctgggatatcgtgcct
gacggcatgccttatgaattggtcaatgtagacatgaccaagaagaatatttccaggctg
atcaactatagctaccgctatttgggtattaaggaaaccgtgattttagcggaccaaatc
atgtatttggggttccgctatgcaacacgttccggtgtctcttttggtatagaggatatg
gaaatccctgctaaaaaggcggacatcattcgttcggcgggagccgaggttaacgaaatc
cagaatcaatattcctccggcttggtaacggatggcgaacgctacaacaaggttgtcgac
atttggtcgcgggcgaatgatcaagtggccaaggtgatgatggagggtttgggggaagac
ttggttctggatgagagcggagctgttttgaaggacgccaacggcaaatccgtaacccaa
aaatcatttaactctatctttatgatggctgagtctggggcgcggggttctgctgcccag
attaggcagttggcgggtatgaggggtttgatggccaagccggacggttccatcatcgaa
acgcctattaccgcgaatttccgggaaggactggacgtactgcaatattttatttccacg
cacggtgctcggaaaggtttggctgatactgcgcttaaaaccgcaaactcaggctatctg
acgcgacgtttggtggacgtggcgcaagacttggtgattgccgagaccgattgcggcact
gaaaacggtttgaccatgatgcccatcatcgagggtggtgacgttgtcgagccgttggtt
gagcgggtgttgggccgcgttgcggctatagatgtgactgaacaggctagtgataaagtt
ttgattccggccggaaccatgattgatgaaaacttggtgtcggtgttggaagagaacggt
atcgataaaatgcttgtgcgctccgtgattacatgtgagtcacggcaaggggtctgtgcc
aaatgttatggccgtgacttagggcgtggccatttagtcaatatcggcgaggcggttggt
gtggttgcggcgcaatccatcggtgagcctggtactcagcttaccatgcgtactttccat
attggtggtgctgcatccaggtcggcggctgtcagtaacgtgcaagttaaatccgtgggt
tcggtcaagctgaacaatatgaagaccgttaaaaaccgggaaaataatttggtcgctgtt
tctcggtcgggcgaagtcggcgttatggatgattacggacgcgaaagagagcgttataaa
attccttacggggctgtgttgtcgatcgaagacggtagtgcggttaaagccggtgatatc
atcgttaattgggacccgcatacacatccggtcatcaccgaggtggatggttttatacag
ttacacgactttattgacggtgtgacggtacaagagcagtcggacgaagtaaccggtctg
acatcgcgagttgttaccgatcccaagcaaagaagttccgctggtaaagaattacggccc
atggtgcgattgattgatgaacacggcgggttgatcaatctgcctggcactgatattcca
gcgcaatactttttgccggctggtgctatcgtcggggtgaaagacggcggcgaggtaagg
gtcggtgacgttttggccaggattccccaagagtccagtaaaacgcgcgatatcaccggt
ggtttaccgcgtgttgccgacttgtttgaggcgcgtaaaaccaaagaccctgcgattttg
gctgaggccacaggtatggtttcattcggtaaagagaccaaaggtaagcaaagggtcatc
attaccgatgctgaaggtgagcaatatgaaaccctgattccaaaatggcgtcatatcacc
gtgtttgaaggtgagtttgtcgagaaaggtgaaacaattgccgaaggtgaattgactccg
cacgatatattgcggctcagaggtatcgaagagttggccgattatctggtcaaggaaatt
caggatgtttaccgactgcaaggggtgaagatcaacgataaacacatcgaagcgataatt
cgtcagatgttgcgaaaagttgagatcacagcgtcgggcgaaactgactttgtcaagggt
gagcaagttgagcgcagtttgatgaatgcggtcaacgatcaagccgagagagagggcaaa
attccggccagctatgaatcgatgctgttaggtattaccaaagcgtcgttagctaccgag
tcctttatttcggcggcgtcattccaagagacaacccgtgttcttaccgatgccgccgtt
agaggtatcagcgatagtttgaatgggttgaaggaaaacgttatcgtcggtaggttgatt
ccggctggtactggattggcttaccacgagcaacggcgcaaaagacgatcgatcgaagcg
tcaaatgaaagcgactcggcaatcagtgcggtagaggcggtcgatgtagaagaagcctta
aagcaggctttaaatattgagtaa |
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