Mus musculus (house mouse): 100861880
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Entry
100861880 CDS
T01002
Symbol
Alyreffm11, Gm21293
Name
(RefSeq) Aly/REF export factor family member 11
KO
K12881
THO complex subunit 4
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03013
Nucleocytoplasmic transport
mmu03015
mRNA surveillance pathway
mmu03040
Spliceosome
mmu05014
Amyotrophic lateral sclerosis
mmu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100861880 (Alyreffm11)
09122 Translation
03013 Nucleocytoplasmic transport
100861880 (Alyreffm11)
03015 mRNA surveillance pathway
100861880 (Alyreffm11)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100861880 (Alyreffm11)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100861880 (Alyreffm11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
100861880 (Alyreffm11)
03041 Spliceosome [BR:
mmu03041
]
100861880 (Alyreffm11)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100861880 (Alyreffm11)
TREX complex
100861880 (Alyreffm11)
Spliceosome [BR:
mmu03041
]
Complex C
Other components
EJC/TREX
100861880 (Alyreffm11)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100861880 (Alyreffm11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
TFIIA
Septin
FoP_duplication
EOS1
DUF6591
DDHD
Presenilin
Motif
Other DBs
NCBI-GeneID:
100861880
NCBI-ProteinID:
NP_001257827
MGI:
5434648
Ensembl:
ENSMUSG00000091779
LinkDB
All DBs
Position
10:103978848..103981288
Genome browser
AA seq
264 aa
AA seq
DB search
MTTMADKMDMSLEDIIKLTKIQQRRHDRPDSRVNRGTGSKRYRPAFTHGGRNRLAPYCRP
KQLPDKWQHDLFIGGFRGQNHVDTGGKLFLSNLHFGVSDADIQLLFAEFGTLKKSAVHYD
RCGRSLGTAQVHFERKADALKAMREYNGAPLDGRPMNIQLATSQIDRQGRPAQSKNRGGM
TRNPGSGVLSGGGTKKWTLGGSQGRGRGTIRNSKLQQQQQQQKQKQQQQQQKQQQKQQQK
QQQQLSAEELDAQLDAYQEMMDTS
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgactaccatggctgacaaaatggacatgtcattggaagacatcattaagctgaccaag
atccagcaaagacgtcatgacaggcctgattcccgggtgaatcgaggcactgggtctaag
aggtataggccagctttcacccatggtggaaggaacaggctggcaccatactgcagacca
aaacaacttccagacaagtggcagcatgacctgttcattggaggcttcaggggtcaaaac
cacgtggatactggtgggaagctcttcttgtcaaatctgcacttcggagtgtcagatgct
gatattcagctactctttgctgaatttggaacgttgaagaaatctgctgtgcactatgat
cgctgtggacgaagtttagggacagcacaggtgcactttgaaaggaaagcagatgccctg
aaggctatgagagagtacaatggcgcccctttggatggccgccctatgaacatccagctt
gccacctcacagattgatagacaaggaagacctgcacaaagcaaaaataggggcggcatg
acaagaaaccctggctctggagtattaagtggtggaggcaccaagaaatggacacttgga
ggcagccagggaagagggagaggcaccatcaggaactcaaaactgcagcaacagcagcag
cagcagaagcagaagcagcagcagcagcagcagaagcagcagcagaagcagcagcagaag
cagcagcagcagctatctgcagaggagctggatgcccagctggatgcttatcaggaaatg
atggacaccagctga
DBGET
integrated database retrieval system
