KEGG   Mus musculus (house mouse): 102635357
Entry
102635357         CDS       T01002                                 
Symbol
Cdc5lrt1, Gm32717
Name
(RefSeq) cell division cycle 5 like, retrotransposed 1
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102635357 (Cdc5lrt1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mmu03041]
    102635357 (Cdc5lrt1)
   03400 DNA repair and recombination proteins [BR:mmu03400]
    102635357 (Cdc5lrt1)
Spliceosome [BR:mmu03041]
 Complex B
  Other components
   Prp19 complex
    102635357 (Cdc5lrt1)
 Complex C
   Prp19-CDC5 complex
    102635357 (Cdc5lrt1)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    102635357 (Cdc5lrt1)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C
Other DBs
NCBI-GeneID: 102635357
NCBI-ProteinID: XP_036012049
MGI: 5591876
Ensembl: ENSMUSG00000112216
UniProt: A0A1W2P7S8
LinkDB
Position
10:complement(118074241..118076700)
AA seq 802 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKTAQRDNEEETTDDP
RKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFR
KMRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAP
QISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQD
RILQEAQNLMALTNVDTPLIGGLNTPLHESDFSGVTPQQQVVQTPNTVLSTPLRTPSNGA
EGLTPRSGTTPKPVTNATPGRTPLRDKLHINPEDGMADHSDPSYVKQMERESREHLRLGF
LGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQATRDAERVKEMKRMHKA
VQKDLPRPSEVNETILRPFDVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKG
KNVGFATNDSEHITYLEHSPYEKFSKEDLKKAQDALVQEMEVVKQGMSHGELSSEAYNQV
WEECYSQVLYLPAQSCYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKIL
LGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLEEDVQRQQER
EKELQQRYADLLMEKETLQAKF
NT seq 2409 nt   +upstreamnt  +downstreamnt
atgccccggattatgatcaaaggaggagtgtggaggaacacggaggatgaaattctgaaa
gcagcggtaatgaaatatgggaaaaaccagtggtctaggattgcctcgttgctgcatagg
aaatcggcaaagcagtgcaaagccagatggtacgaatggctggatccaagtattaaaaaa
actgaatggtccagagaagaggaagaaaaactcttgcacctggccaagctgatgccaacg
cagtggaggaccattgctccaatcataggaagaacagcagcccagtgcctggaacactat
gaattcctcttggacaaaactgctcaaagggacaatgaagaggaaacaacagatgacccc
cgaaagcttaagcctggagagatcgatccaaacccagagaccaagccagcccggccggac
ccaattgacatggatgaggatgaacttgagatgctctctgaggctcgagcccgtctggcc
aatactcaaggaaagaaggctaaaaggaaagcaagagaaaagcagttggaagaagccagg
cgccttgctgccctccagaaaagacgagagcttcgagcagctggcatagagattcagaag
aaaaggaaaaggaagagaggtgttgattataatgctgaaatcccatttgaaaaaaagcca
gctcttggtttttatgatacttctgaggagaattaccaggcccttgatgcagacttcagg
aaaatgcgacagcaggatcttgatggggagctaagatctgaaaaagaaggaagagataga
aaaacagacaaacagcgtttaaaaaggaaaaaggagtctgatttaccatcagctatcctc
caaaccagtggtgtctccgagttcactaaaaagagaagcaaacttgtgttgcctgcgcct
cagatttcagatgctgaactccaggaagttgtcaaggtaggccaggccagtgaagtcgca
cggcagacggcggaggagtcaggaataacaaactctgcttctagcactctcctgtctgag
tacaatgtcacaaacaacagcatcgctctgagaacaccacggacaccagcccctcaagac
aggattctacaggaagctcagaacctcatggccttgaccaatgtggacactccgttgata
ggtgggcttaataccccactgcatgagagtgacttctctggtgtgaccccacagcagcaa
gttgtgcagactccaaatacagttctgtctacccctctcaggactccttctaatggagct
gaagggctgactccccgaagtggaacaactcctaaaccagtcactaatgccaccccaggt
agaacaccacttagagacaagttacacattaatccagaggatggaatggcagaccacagt
gacccctcttacgtgaagcagatggaaagagaatctcgtgaacatctccgtctcgggttc
ttaggcctccctgcacctaagaacgattttgaaatcgttctgcctgaaaatgccgagaag
gaactggaagaacgtgaaatagatgatacctacattgaagatgctgctgatgtggatgct
cgaaagcaggccacccgagatgctgagcgtgtaaaggaaatgaaacgaatgcacaaagcc
gttcagaaggatctgcccaggccgtctgaagtaaatgaaactattttaagacctttcgat
gtagaaccacctctaacagatttacagaagagcgaagaactgatcaaaaaagaaatgatt
acgatgcttcattatgatcttctacatcatccctacgaaccatctggaaacaaaaaagga
aaaaatgttgggtttgctaccaacgattcagagcacattacttatcttgagcatagccct
tatgagaagttctccaaagaagatctgaaaaaggcccaggatgctctggtacaagagatg
gaagtggtcaaacaaggaatgagccatggagaactctccagtgaagcttacaaccaggtg
tgggaggaatgctacagtcaagtcctctatcttcctgctcagagctgctacactcgcgct
aatcttgctagcaaaaaggacagaattgaatcacttgaaaagagacttgagataaacagg
ggtcacatgacaacagaagccaagagagctgcaaagatggaaaagaagatgaagattttg
cttggtggataccagtctcgtgctatggggctcatgaaacagttgaatgacttatgggac
cagattgagcaggctcacttggagctacgcacttttgaagaactcaagaaacatgaagac
tctgctattccccgtaggctagagtgtctagaagaagatgtgcagcggcaacaggaacga
gagaaagagcttcaacagagatacgcggatttgctgatggagaaagagactttacaggca
aagttctga

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