KEGG   Mus musculus (house mouse): 104082
Entry
104082            CDS       T01002                                 
Symbol
Wdr7, TRAG, mKIAA0541
Name
(RefSeq) WD repeat domain 7
  KO
K24738  rabconnectin-3b
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04142  Lysosome
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    104082 (Wdr7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mmu04131]
    104082 (Wdr7)
Membrane trafficking [BR:mmu04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    104082 (Wdr7)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_EML EIF3I WDR55 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_Aladin WD40_MABP1-WDR62_2nd Beta-prop_ACSF4 Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_VPS8 Beta-prop_HPS5 Beta-prop_SCAP WDR72_alpha-sol Beta-prop_WDR19_1st WDR90_beta-prop_4th PEP5_VPS11_N Ge1_WD40 Beta-prop_Vps41 Tricorn_2nd
Other DBs
NCBI-GeneID: 104082
NCBI-ProteinID: NP_001014981
MGI: 1860197
Ensembl: ENSMUSG00000040560
UniProt: Q920I9
LinkDB
Position
18:63841731..64122831
AA seq 1489 aa
MAGNSLVLPIVLWGRKAPTHCISSILLTDDGGTIVTGCHDGQICLWDVSVELEVNPRALL
FGHTASITCLSKACASGDKRYTVSASANGEMCLWDVNDGRCIEFTKLACTHTGIQFYQFS
VGNQQEGRLLCHGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSQRTQEDTVVAL
SVTGILKVWIVTSEMSGMQDTEPIFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYWRV
FDAGDYSLLCSGPSENGQTWTGGDFVSADKVIIWTENGQSYIYKLPASCLPASDSFRSDV
GKAVENLIPPVQHSLLDQKDKELVICPPVTRFFYGCKEYLHKLLIQGDSSGRLNIWNIAD
IAEKQEADEGLKMTTCISLQEAFDKLKPCPAGIIDQLSVIPNSNEPLKVTASVYIPAHGR
LVCGREDGSIIIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQVSARY
DQRYLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCICSVASDH
SVGLLSLREKKCIMLASRHLFPIQVIKWRPSDDYLVVGCTDGSVYVWQMDTGALDRCAMG
ITAVEILNACDEAVPAAVDSLSHPAVNLKQAMTRRSLAALKNMAHHKLQTLATNLLASEA
SDKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALISPENL
QKASGSSDKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDEEEDEEEARRQSREDSDPEY
RASKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNEVLDEVCLDRLGMLKPHCTVSFGLLSR
GGHMSLMLPGYNQAAGKLLHAKAEVGRKLPAAEGVGKGTYTVSRAVTTQHLLSIISLANT
LMSMTNATFIGDHMKKGPTRPPRPGTPDLSKARDSPPPSSNIVQGQIKQAAAPVVSARSD
ADHSGSDSASPALPTCFLVNEGWSQLAAMHCVMLPDLLGLERFRPPLLEMLARRWQDRCL
EVREAAQALLLAELRRIEQAGRKETIDTWAPYLPQYMDHVISPGVTAEAMQTMAAAPDAS
GPEAKVQEEEHDLVDDDITAGCLSSVPQMKKISTSYEERRKQATAIVLLGVIGAEFGAEI
EPPKLLTRPRSSSQIPEGFGLTSGGSNYSLARHTCKALTYLLLQPPSPKLPPHSTIRRTA
TDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLSPAADSARSARHALSL
IATARPPAFITTIAKEVHRHTALAANTQSQQSIHTTTLARAKGEILRVIEILIEKMPTDV
VDLLVEVMDIIMYCLEGSLVKKKGLQECFPAICRFYMVSYYERSHRIAVGARHGSVALYD
IRTGKCQTIHGHKGPITAVSFAPDGRYLATYSNTDSHISFWQMNTSLLGSIGMLNSAPQL
RCIKTYQVPPVQPASPGSHNALKLARLIWTSNRNVILMAHDGKEHRFMV
NT seq 4470 nt   +upstreamnt  +downstreamnt
atggcaggaaacagcctagttctgcccattgttctttggggccgcaaagcacccacacat
tgcatttcgtcaatactgttgacagatgatgggggcacaattgtaactggatgccacgat
ggacaaatatgtctctgggatgtttcggtagaactagaagttaatccccgagcactgtta
tttggccacacagcatccatcacttgtttgtcaaaagcctgcgcttctggggacaagcgg
tacactgtgagcgcgtctgcaaacggagagatgtgcctctgggatgtgaacgatggcaga
tgtattgaatttaccaagttagcctgcacacacactggcatacagttctaccagttctct
gttgggaaccagcaagagggcaggctcctctgccatggacattaccctgaaatcctcgtt
gtggatgccaccagccttgaggtgttgtattccttggtatcgaagatctctccagactgg
atcagctccatgagcatcatccgctctcagcggacacaagaggacactgtggtggcgctc
tctgtgacaggtattctgaaggtgtggattgtcacctctgaaatgagtggaatgcaggat
actgagccaatatttgaggaggaatccaaaccaatttattgtcagaattgccaaagcatc
tctttttgtgcattcacacagaggtcacttttggtcgtatgctccaaatactggagggtg
tttgatgctggcgactactctctgttgtgctcaggtcctagtgaaaatggacagacatgg
actggaggggactttgtgtctgcagacaaagtcatcatctggacagaaaatgggcagagt
tacatctacaaactccctgccagttgccttccagctagtgattcattccgcagcgacgtg
gggaaagcagtggaaaatttgatccctcctgtgcagcatagcctcttggatcagaaagat
aaagagttggtaatttgtcctcctgttactcggtttttctacggatgcaaggaatatttg
cataagctactaattcagggcgattcttctggaaggttaaatatctggaacatagcagac
atagcagagaaacaggaagccgatgaagggctaaagatgacaacttgtattagcttgcaa
gaggcatttgacaagctgaagccttgccctgctggaattatcgatcagctaagtgtgatt
cccaacagcaacgaacctcttaaagtaactgcgagtgtctacataccagcacacgggcga
cttgtttgtggccgggaagatggaagcatcattattgtgcctgccacccagacggccata
gttcagctattgcaaggagaacacatgctcagaagaggttggccccctcacagaaccctc
cgtggccatcggaacaaagtcacgtgcctgctgtatccccatcaggtctcagctcggtat
gaccaaagatacctgatatctggaggtgtggatttttccgtcataatttgggacatattt
tctggagaaatgaaacatatcttctgtgttcatggtggtgagatcacacaacttctggtc
cccccggaaaactgtagtgcaagagttcaacactgcatctgttccgtagccagtgaccac
tctgtaggcctcctaagtctgcgagagaaaaaatgcatcatgttggcgtctcgccacctc
tttcctattcaggtgatcaagtggaggccttccgacgactacctggtggtgggatgcaca
gacggctctgtgtatgtctggcagatggacactggtgcgctggatcgttgtgcaatggga
atcacagcagtggagatactgaacgcttgtgacgaagccgttcctgccgctgtagactct
cttagtcatccagcagtcaacctgaaacaagccatgacaagacggagtctcgccgccctt
aaaaatatggcccaccataagctgcaaacccttgcaacgaaccttttggcttctgaggcc
tctgacaagggtaatttacctaaatattcccataactccctgatggttcaagcaataaag
acaaacctaacagacccggatatccatgtgcttttctttgatgtggaagctttgattatt
caactcctgactgaagaagcctctaggccgaatactgcacttatttccccagagaatctg
cagaaagcatctggcagttcagacaaagggggctctttcctaactgggaagcgagcagcg
gttcttttccagcaagtgaaagaaactatcaaagagaacataaaggaacaccttctggat
gaggaggaggacgaggaggaggcgaggaggcagagcagggaggatagtgaccctgagtac
cgggccagcaagtccaagccactgaccctactagaatacaaccttactatggataccgca
aaattattcatgtcctgtctccacgcctggggcttgaatgaagttctggatgaagtttgt
ctcgatcgcctcggaatgctgaaaccgcactgcacggtgtcctttggtctcctatcgaga
ggaggtcatatgtcgctgatgcttcccggttataatcaggctgctggaaaactgctgcat
gcgaaagcagaagtaggaaggaagctgccagcagcggagggcgtaggcaagggaacctac
acagtgtctcgagcggtcaccactcagcatctgttgtccatcatatccctggcgaatact
ttaatgagtatgaccaatgcaactttcattggcgatcacatgaagaagggccccaccagg
ccgcctagacctggcaccccagacctctctaaggcgagggattcccctccaccctccagt
aacattgtgcaaggacagattaaacaagccgctgcgcctgtcgtttctgctcggtctgac
gctgatcactctggctctgactctgcctctcctgctttacctacctgtttcttagtaaat
gaaggctggagccagttagccgccatgcactgtgttatgttgcctgacctgctggggctg
gagagattcaggcctcctctcctggagatgctagctcgaagatggcaggaccgatgcttg
gaggtgagagaggctgcacaggccctgcttctagctgagctgagaaggattgagcaggca
ggacggaaggagacgatcgacacctgggctccttacttacctcagtatatggaccatgtc
atatcacctggcgtcacggcggaagccatgcagactatggcagctgctccagatgcctcg
ggcccagaagccaaagtccaggaagaagagcatgacctggtggatgatgacatcactgca
ggttgcttgtcaagtgtcccacagatgaaaaaaatctccacgtcttacgaagaaagaagg
aagcaggccacggctattgttctcctgggagtgataggggcagagtttggagctgaaatt
gaaccgccgaagctgctgaccaggcctcgaagctccagtcaaatccctgaaggctttggc
ttgaccagcggaggctccaactactccctggccagacacacgtgcaaggcactgacatat
cttctgctacagccaccaagtcccaagctccctcctcatagcaccatccggagaactgcc
actgacctgattgggcgagggttcactgtatgggagccctacatggatgtgtccgctgtc
ctgatggggctgctggagctctgtgcagacgctgagaaacaacttgccaacatcacaatg
gggctgcctctgagccctgcagctgactctgcccgctccgcaaggcacgccctgtctctc
atcgccacagccagaccacccgccttcatcaccaccatagctaaggaggtccacagacac
acggcccttgcagcgaacacccagtcccagcagagtatacacaccaccaccctggcgagg
gctaaaggcgaaatcctgagagtcattgaaattctcattgaaaagatgcccacggatgtg
gtggatcttcttgtggaggtgatggatatcatcatgtactgcctggaaggatctttagtg
aaaaagaagggtcttcaggagtgttttccagctatctgcaggttctacatggtcagctat
tatgagcgcagtcacagaatcgcagttggagcacgccatggctcagtagccctgtatgac
atccggactggaaaatgtcagacaatccatgggcacaagggaccaatcacggcggtgtcc
tttgctcctgatggccgttaccttgccacctactcgaacaccgacagccacatttccttc
tggcagatgaacacctcactcctgggaagcattggaatgctgaactcagctcctcagctg
cgctgcatcaagacctaccaggtccctccagtgcagccagcatcccctggctcccacaac
gcccttaagttggcccggctcatctggacttccaaccggaatgttatcctcatggcccat
gatgggaaggaacaccgcttcatggtctga

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