Mus musculus (house mouse): 104082
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Entry
104082 CDS
T01002
Symbol
Wdr7, TRAG, mKIAA0541
Name
(RefSeq) WD repeat domain 7
KO
K24738
rabconnectin-3b
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
104082 (Wdr7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmu04131
]
104082 (Wdr7)
Membrane trafficking [BR:
mmu04131
]
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
104082 (Wdr7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_EML
EIF3I
WDR55
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_ACSF4
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_SCAP
WDR72_alpha-sol
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
PEP5_VPS11_N
Ge1_WD40
Beta-prop_Vps41
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
104082
NCBI-ProteinID:
NP_001014981
MGI:
1860197
Ensembl:
ENSMUSG00000040560
UniProt:
Q920I9
LinkDB
All DBs
Position
18:63841731..64122831
Genome browser
AA seq
1489 aa
AA seq
DB search
MAGNSLVLPIVLWGRKAPTHCISSILLTDDGGTIVTGCHDGQICLWDVSVELEVNPRALL
FGHTASITCLSKACASGDKRYTVSASANGEMCLWDVNDGRCIEFTKLACTHTGIQFYQFS
VGNQQEGRLLCHGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSQRTQEDTVVAL
SVTGILKVWIVTSEMSGMQDTEPIFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYWRV
FDAGDYSLLCSGPSENGQTWTGGDFVSADKVIIWTENGQSYIYKLPASCLPASDSFRSDV
GKAVENLIPPVQHSLLDQKDKELVICPPVTRFFYGCKEYLHKLLIQGDSSGRLNIWNIAD
IAEKQEADEGLKMTTCISLQEAFDKLKPCPAGIIDQLSVIPNSNEPLKVTASVYIPAHGR
LVCGREDGSIIIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQVSARY
DQRYLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCICSVASDH
SVGLLSLREKKCIMLASRHLFPIQVIKWRPSDDYLVVGCTDGSVYVWQMDTGALDRCAMG
ITAVEILNACDEAVPAAVDSLSHPAVNLKQAMTRRSLAALKNMAHHKLQTLATNLLASEA
SDKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALISPENL
QKASGSSDKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDEEEDEEEARRQSREDSDPEY
RASKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNEVLDEVCLDRLGMLKPHCTVSFGLLSR
GGHMSLMLPGYNQAAGKLLHAKAEVGRKLPAAEGVGKGTYTVSRAVTTQHLLSIISLANT
LMSMTNATFIGDHMKKGPTRPPRPGTPDLSKARDSPPPSSNIVQGQIKQAAAPVVSARSD
ADHSGSDSASPALPTCFLVNEGWSQLAAMHCVMLPDLLGLERFRPPLLEMLARRWQDRCL
EVREAAQALLLAELRRIEQAGRKETIDTWAPYLPQYMDHVISPGVTAEAMQTMAAAPDAS
GPEAKVQEEEHDLVDDDITAGCLSSVPQMKKISTSYEERRKQATAIVLLGVIGAEFGAEI
EPPKLLTRPRSSSQIPEGFGLTSGGSNYSLARHTCKALTYLLLQPPSPKLPPHSTIRRTA
TDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLSPAADSARSARHALSL
IATARPPAFITTIAKEVHRHTALAANTQSQQSIHTTTLARAKGEILRVIEILIEKMPTDV
VDLLVEVMDIIMYCLEGSLVKKKGLQECFPAICRFYMVSYYERSHRIAVGARHGSVALYD
IRTGKCQTIHGHKGPITAVSFAPDGRYLATYSNTDSHISFWQMNTSLLGSIGMLNSAPQL
RCIKTYQVPPVQPASPGSHNALKLARLIWTSNRNVILMAHDGKEHRFMV
NT seq
4470 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaacagcctagttctgcccattgttctttggggccgcaaagcacccacacat
tgcatttcgtcaatactgttgacagatgatgggggcacaattgtaactggatgccacgat
ggacaaatatgtctctgggatgtttcggtagaactagaagttaatccccgagcactgtta
tttggccacacagcatccatcacttgtttgtcaaaagcctgcgcttctggggacaagcgg
tacactgtgagcgcgtctgcaaacggagagatgtgcctctgggatgtgaacgatggcaga
tgtattgaatttaccaagttagcctgcacacacactggcatacagttctaccagttctct
gttgggaaccagcaagagggcaggctcctctgccatggacattaccctgaaatcctcgtt
gtggatgccaccagccttgaggtgttgtattccttggtatcgaagatctctccagactgg
atcagctccatgagcatcatccgctctcagcggacacaagaggacactgtggtggcgctc
tctgtgacaggtattctgaaggtgtggattgtcacctctgaaatgagtggaatgcaggat
actgagccaatatttgaggaggaatccaaaccaatttattgtcagaattgccaaagcatc
tctttttgtgcattcacacagaggtcacttttggtcgtatgctccaaatactggagggtg
tttgatgctggcgactactctctgttgtgctcaggtcctagtgaaaatggacagacatgg
actggaggggactttgtgtctgcagacaaagtcatcatctggacagaaaatgggcagagt
tacatctacaaactccctgccagttgccttccagctagtgattcattccgcagcgacgtg
gggaaagcagtggaaaatttgatccctcctgtgcagcatagcctcttggatcagaaagat
aaagagttggtaatttgtcctcctgttactcggtttttctacggatgcaaggaatatttg
cataagctactaattcagggcgattcttctggaaggttaaatatctggaacatagcagac
atagcagagaaacaggaagccgatgaagggctaaagatgacaacttgtattagcttgcaa
gaggcatttgacaagctgaagccttgccctgctggaattatcgatcagctaagtgtgatt
cccaacagcaacgaacctcttaaagtaactgcgagtgtctacataccagcacacgggcga
cttgtttgtggccgggaagatggaagcatcattattgtgcctgccacccagacggccata
gttcagctattgcaaggagaacacatgctcagaagaggttggccccctcacagaaccctc
cgtggccatcggaacaaagtcacgtgcctgctgtatccccatcaggtctcagctcggtat
gaccaaagatacctgatatctggaggtgtggatttttccgtcataatttgggacatattt
tctggagaaatgaaacatatcttctgtgttcatggtggtgagatcacacaacttctggtc
cccccggaaaactgtagtgcaagagttcaacactgcatctgttccgtagccagtgaccac
tctgtaggcctcctaagtctgcgagagaaaaaatgcatcatgttggcgtctcgccacctc
tttcctattcaggtgatcaagtggaggccttccgacgactacctggtggtgggatgcaca
gacggctctgtgtatgtctggcagatggacactggtgcgctggatcgttgtgcaatggga
atcacagcagtggagatactgaacgcttgtgacgaagccgttcctgccgctgtagactct
cttagtcatccagcagtcaacctgaaacaagccatgacaagacggagtctcgccgccctt
aaaaatatggcccaccataagctgcaaacccttgcaacgaaccttttggcttctgaggcc
tctgacaagggtaatttacctaaatattcccataactccctgatggttcaagcaataaag
acaaacctaacagacccggatatccatgtgcttttctttgatgtggaagctttgattatt
caactcctgactgaagaagcctctaggccgaatactgcacttatttccccagagaatctg
cagaaagcatctggcagttcagacaaagggggctctttcctaactgggaagcgagcagcg
gttcttttccagcaagtgaaagaaactatcaaagagaacataaaggaacaccttctggat
gaggaggaggacgaggaggaggcgaggaggcagagcagggaggatagtgaccctgagtac
cgggccagcaagtccaagccactgaccctactagaatacaaccttactatggataccgca
aaattattcatgtcctgtctccacgcctggggcttgaatgaagttctggatgaagtttgt
ctcgatcgcctcggaatgctgaaaccgcactgcacggtgtcctttggtctcctatcgaga
ggaggtcatatgtcgctgatgcttcccggttataatcaggctgctggaaaactgctgcat
gcgaaagcagaagtaggaaggaagctgccagcagcggagggcgtaggcaagggaacctac
acagtgtctcgagcggtcaccactcagcatctgttgtccatcatatccctggcgaatact
ttaatgagtatgaccaatgcaactttcattggcgatcacatgaagaagggccccaccagg
ccgcctagacctggcaccccagacctctctaaggcgagggattcccctccaccctccagt
aacattgtgcaaggacagattaaacaagccgctgcgcctgtcgtttctgctcggtctgac
gctgatcactctggctctgactctgcctctcctgctttacctacctgtttcttagtaaat
gaaggctggagccagttagccgccatgcactgtgttatgttgcctgacctgctggggctg
gagagattcaggcctcctctcctggagatgctagctcgaagatggcaggaccgatgcttg
gaggtgagagaggctgcacaggccctgcttctagctgagctgagaaggattgagcaggca
ggacggaaggagacgatcgacacctgggctccttacttacctcagtatatggaccatgtc
atatcacctggcgtcacggcggaagccatgcagactatggcagctgctccagatgcctcg
ggcccagaagccaaagtccaggaagaagagcatgacctggtggatgatgacatcactgca
ggttgcttgtcaagtgtcccacagatgaaaaaaatctccacgtcttacgaagaaagaagg
aagcaggccacggctattgttctcctgggagtgataggggcagagtttggagctgaaatt
gaaccgccgaagctgctgaccaggcctcgaagctccagtcaaatccctgaaggctttggc
ttgaccagcggaggctccaactactccctggccagacacacgtgcaaggcactgacatat
cttctgctacagccaccaagtcccaagctccctcctcatagcaccatccggagaactgcc
actgacctgattgggcgagggttcactgtatgggagccctacatggatgtgtccgctgtc
ctgatggggctgctggagctctgtgcagacgctgagaaacaacttgccaacatcacaatg
gggctgcctctgagccctgcagctgactctgcccgctccgcaaggcacgccctgtctctc
atcgccacagccagaccacccgccttcatcaccaccatagctaaggaggtccacagacac
acggcccttgcagcgaacacccagtcccagcagagtatacacaccaccaccctggcgagg
gctaaaggcgaaatcctgagagtcattgaaattctcattgaaaagatgcccacggatgtg
gtggatcttcttgtggaggtgatggatatcatcatgtactgcctggaaggatctttagtg
aaaaagaagggtcttcaggagtgttttccagctatctgcaggttctacatggtcagctat
tatgagcgcagtcacagaatcgcagttggagcacgccatggctcagtagccctgtatgac
atccggactggaaaatgtcagacaatccatgggcacaagggaccaatcacggcggtgtcc
tttgctcctgatggccgttaccttgccacctactcgaacaccgacagccacatttccttc
tggcagatgaacacctcactcctgggaagcattggaatgctgaactcagctcctcagctg
cgctgcatcaagacctaccaggtccctccagtgcagccagcatcccctggctcccacaac
gcccttaagttggcccggctcatctggacttccaaccggaatgttatcctcatggcccat
gatgggaaggaacaccgcttcatggtctga
DBGET
integrated database retrieval system