Mus musculus (house mouse): 104721
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Entry
104721 CDS
T01002
Symbol
Ddx1, DBP-RB
Name
(RefSeq) DEAD box helicase 1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmu03041
]
104721 (Ddx1)
03016 Transfer RNA biogenesis [BR:
mmu03016
]
104721 (Ddx1)
Enzymes [BR:
mmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104721 (Ddx1)
Spliceosome [BR:
mmu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104721 (Ddx1)
Transfer RNA biogenesis [BR:
mmu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
104721 (Ddx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
DUF5766
CMS1
Motif
Other DBs
NCBI-GeneID:
104721
NCBI-ProteinID:
NP_598801
MGI:
2144727
Ensembl:
ENSMUSG00000037149
UniProt:
Q91VR5
LinkDB
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Position
12:complement(13269308..13299175)
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AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRGTRGLLKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPAHIKNQALFPACVLKNAELKF
NFGEEEFKFPPKDGFVALSKAPDNYIVKSQHTGNAQVSQTKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQITCDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDKLWERLGKNHIRTDDVHAKDNTRPGAN
SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSNRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGNYKGHVDVLAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctccgaaatgggtgttatgccggagattgcacaagctgtggaggagatg
gattggcttctaccaactgatatccaggcagaatctatcccattgatcctaggaggaggg
gatgtactcatggctgcagaaacaggaagtggaaaaactggtgcatttagtattcccgtt
atccagatagtgtatgaaactctgaaagaccaacaggaaggaaagaaagggaaaacaact
attaaaactggtgcttcagtgctcaacaagtggcagatgaacccatatgatagagggtct
gcttttgcaattggatcagatggtctgtgttgtcagagcagagaagtgaaggagtggcat
ggatgcagaggaactagaggactgctgaaagggaagcactactatgaggtgtcctgtcat
gaccaagggctatgcagagttgggtggtctaccatgcaggcttccttagacctaggtact
gacaagtttggatttggcttcggtggaacaggaaagaaatctcataataaacaatttgat
aattatggagaggaattcactatgcatgataccattggatgttacttagatatcgataaa
gggcatgtgaagttctctaagaatggaaaagatcttggtctggcatttgaaataccagca
catataaaaaaccaagccctcttccctgcctgtgttttgaagaatgctgaattgaaattt
aactttggtgaagaagaatttaagtttccaccaaaagatggttttgttgctctttccaag
gccccagataattacatcgtcaaatctcagcacacaggtaatgcacaggtgtcacaaaca
aaatttctcccgaatgctccaaaagctctcattgtggaaccctccagagagttagctgag
caaaccttgaacaacgtcaagcagtttaagaagtatattgataatcctaaattgcgggag
cttctcataattggtggcgttgcggctcgggatcagctctctgttctggataatggggtt
gacattgttgtcggtactccaggaagattggatgatttggtgtcgactggaaagctcaac
ttgtctcaagttagattcctggtcctggatgaagcagatgggcttctctctcaaggctac
tctgacttcattaaccggatgcacaaccagattccgcagattacgtgtgatgggaaaaga
cttcaggtgattgtttgctctgctactctgcattcttttgatgtaaagaagctatcggag
aagataatgcattttcccacatgggtcgatttgaaaggagaagattctgttccagatact
gtgcatcatgtcgttgtccctgtgaaccccaaaactgacaagctttgggaaaggctgggg
aagaaccacattcgaactgatgatgtacacgcaaaggataacacaagacctggtgctaac
agtccagagatgtggtctgaagctattaaaatactgaagggggagtatgctgtccgagca
atcaaggaacacaagatggatcaagcaattatcttctgtagaactaaaattgactgtgat
aacttggagcagtactttatgcagcaaggaggaggacctgacaaaaaaggacaccagttc
tcatgtgtatgtcttcatggtgacagaaagcctcatgagagaaagcaaaacttggaacga
tttaagaaaggagacgtaagattcttgatttgcacagatgtagctgctagagggattgat
atccatggcgttccttatgtgatcaacgtcaccctgcctgatgagaagcagaattatgtg
caccggatcggcagagtgggacgagctgaaaggatgggcctggctatttccctggtggca
accgagaaagaaaaggtttggtatcatgtatgtagcaaccgtgggaagggatgctataac
actagactcaaggaagatggcggctgtactatctggtacaatgaaatgcagctactttcc
gagatagaagagcacctgaactgcaccatttcccaggtcgagccagatataaaggttcca
gtggatgagtttgatgggaaagtcacatacggtcaaaaaagggctgctggcggtggaaac
tacaaaggccatgtggatgtcctggcacctaccgttcaagagttggctgcccttgaaaag
gaagcacagacctctttcctacaccttggctaccttcccaaccagctgttccgaaccttc
tga
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