Mus musculus (house mouse): 106583
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Entry
106583 CDS
T01002
Symbol
Scaf8, A630086M08Rik, A930036P18Rik, Rbm16, mKIAA1116
Name
(RefSeq) SR-related CTD-associated factor 8
KO
K13191
RNA-binding protein 16
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmu03021
]
106583 (Scaf8)
03041 Spliceosome [BR:
mmu03041
]
106583 (Scaf8)
Transcription machinery [BR:
mmu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
106583 (Scaf8)
Spliceosome [BR:
mmu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
106583 (Scaf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
DUF3525
Motif
Other DBs
NCBI-GeneID:
106583
NCBI-ProteinID:
NP_598884
MGI:
1925212
Ensembl:
ENSMUSG00000046201
UniProt:
Q6DID3
Q8C9D3
LinkDB
All DBs
Position
17:3165247..3249134
Genome browser
AA seq
1268 aa
AA seq
DB search
MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN
NVFKSEIIQPLLDMAAGIPPPVVTPVLASTTAAMSNTPGTPVTPVTPANVVQGLPDPWVS
QIANTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSILQALDAGLVVQLQALTAQL
TAAAAAANTLTPLDQGVSFNKKLMDRFDFGEDSEHSEESKKEMPTPQLSHVSESVNNSIF
HQIAEQLQQQNLEQLRQQLLEQQQPQKVTPQDSQEGTFGSEHSASPSQGSSQQHFLEPEA
NLDDSIDIQQQDMDIDEGQDVVEEEIFEPEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRS
GSRKRKHRKRSRSHSREKKRKASRSYSSERRAREREKERQKKGLPPVRSKTLSVCSTTLW
VGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDSFRALQKLSSGSYKIG
SKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVDDLDGFAEGGMIDQETVNAEWE
TVKASEPVKEPVQTAQSPAPVEKESVVTTQAEVFPPPVAMLQIPVAPAVPAVSLVPPAFP
VSMPVPPPGFNPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPAIPPVVPTSLVQPPL
SMTPEAVKDVGFGSLVLPSGSVAGSLAPSTLPAGNVFNPPSKAEPEEKVPHLIEHQIPSG
ENTRPVIPSDIPSSAAMLAQPPGASSTSGILCVQRPNVSSNSEILGVRPANVSNSAAIMG
AQPPNILNNSGILAIQPPNVSSGSGLLGVLPPNLPNNSGLVGLQPPNVTSPAGLLGTQPP
IGPQNLPPLAIPAQRMPALPMLDIRPGLIAQAPGPRFPLLQPGIPPQRGIPPPSVLDAAL
HPPPRGPFPPGDLFSQPERPFLAPGRPSIDNVPNPDKRIPLGNDNIQQEGDRDYRFPPIE
TREGITRPPQVDVRDVVGRRLDPREGPGRPPLDARDHFGRPPVDMRENLVRPSLDHLGRR
DHFGFPPEKPWGPRDFDEREHRVLPVFGGPKGLHEERGRFRAGNYRFDPRSGPWNRGFGQ
EVHRDFDDRRRPWERQRDRDDRDFDFCREINGNRLGRDRIQNTWVPPPHARVFDYFEGAT
SQRKGDNVPQVNGENTERHAQPPPLPVQKDPELYEKLASSGDVDKEESGTVAGVESEAVV
ESTETEGT
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaagaccttcaacagcgagttgtattcactgaatgactataagccaccc
atttctaaagcaaaaatgacccaaattacaaaggcagccatcaaagctattaagttttat
aaacatgtggtacaaagtgttgagaaattcattcagaaatgtaaaccagaatacaaggta
cctggactatatgttattgactccattgtgcgacaatcccggcatcagtttggtcaagaa
aaggatgtgtttgcacccagatttagtaataacatcattagcacttttcagaatttatat
cgttgccctggggatgacaagagtaaaatagtgagagtattaaacttatggcagaagaat
aatgtttttaagagtgagattatccagcctcttctggatatggcggcagggattcctccc
ccagttgtcacgcctgttttggccagcaccactgcagctatgagcaacactccaggaaca
cccgtgacacctgttactccagccaatgtggtccaaggcttacctgatccatgggtatct
cagatagcaaacacagacacactggcagctgttgctcagatcctacaaagtcctcaaggt
caacagcttcagcagctaatacaaaccttacagatacagcagcagaagcctcagccttct
atcctgcaggccttggatgctggtcttgtggttcagttacaggcactcactgcacagctc
acagctgcagctgctgcagccaacacacttacgcccttggatcagggagtctctttcaac
aagaagttgatggatagatttgattttggggaagattctgagcatagtgaagaatccaaa
aaggaaatgcctactcctcaactctctcacgtttcagagtctgtgaacaactccatcttc
catcagatagcagaacagctgcagcagcagaacttggagcagttgcgacagcagctcctg
gagcagcagcagcctcagaaggtaactcctcaagatagccaggaggggacatttgggtct
gagcactcagcttctccctcacaagggagtagccaacagcattttctggaacctgaagca
aatttagatgattccatagacattcagcaacaggatatggatattgatgaagggcaagat
gttgttgaagaggagatctttgaaccagaagctaagaaagtagctgttcgctcaagatca
agaactcattcacgatctcgatcaaggtcaccaagaaaacgaaggtccaggtcacgctct
gggtcccgaaagcgaaagcacaggaagcggtctcggtcccactcgagagagaaaaagaga
aaagcctcacgctcctactccagtgagcgcagagccagggaaagggagaaagagcgccag
aaaaagggcttgcctcctgtcaggtcaaaaacactaagtgtatgcagcactactctctgg
gttggccaagtggacaagaaggctacacagcaagatttaaccaacctttttgaggaattt
ggacaaattgaatccattaatatgattccacccaggggctgtgcatatgtctgcatggtt
catcgacaagattcatttcgggctcttcagaaactgagttcaggatcctataaaattggt
tccaaggtcattaagattgcctgggctttgaacaaaggtgtaaagacagaatacaaacag
ttctgggatgtggatcttggcgtcacatatataccctgggaaaaagtgaaagtagatgac
ttggatggctttgcagagggcggcatgattgatcaggagactgtaaatgctgaatgggaa
actgtgaaagcctcagaacctgttaaagagccagtgcagactgcacagagtccagctcca
gttgagaaggagtcagtggtcaccacacaggcagaggttttccctcctcctgtcgccatg
ctgcagattcctgtagcaccagctgttcctgcagttagcttagttcctccagcgtttcct
gtgtcgatgcctgtcccccctcctggattcaacccgatccctccacctccttttctacga
gcaagttttaacccttcacaaccacctcctggttttatgccacctccagttcccccacct
gtggtacctccccctgcaatcccaccggtagtaccaacatctttagtgcaaccaccattg
tccatgacccctgaagctgtgaaagatgttggatttggcagcctggttttaccaagtggt
tctgttgctggcagtcttgctccttcaactctaccagctggaaatgtttttaatcctccc
agtaaagcagagcctgaagaaaaagtacctcaccttatagagcaccagattccttctggt
gagaacacaagaccagtgattccaagtgatattccaagtagtgctgcaatgttagcacag
ccgcctggggcctcaagcacctctgggatcctgtgcgtgcagagaccaaatgtatcaagt
aattctgaaattctgggggttcgtccagctaatgtttccaacagtgctgcaattatggga
gcccagccaccaaatattctaaataactctggaattttggccatacagccaccaaatgtg
tccagtggctctggacttcttggggtactgcctccaaacttgcctaacaactctggactt
gtaggactacagccaccaaatgttacaagtcctgctggacttttgggaacacagccacca
attggacctcaaaacttaccacctttagccatccctgctcaaaggatgcccgcgttgcca
atgttagacattcgcccaggactgatagcacaggctcccgggccacgattccctttacta
cagcctggaattccaccacaacgcggtatccctcccccatcggtacttgatgcagctctt
catcctccaccccgcggaccttttcctccaggagatcttttcagtcagccagaaagacct
tttctggcccctggaagaccaagtatagacaatgttcccaacccagataaaagaatacca
cttgggaatgacaatattcagcaggaaggggatagagattaccgctttcctcctatagaa
accagggagggcattaccagacctcctcaggtggatgttagggatgtggttgggcgacgt
ctagatcccagagaaggccctggaaggcctccattagatgctagggatcattttggaaga
cctcctgtggacatgagggagaatcttgtgaggccaagtctagaccaccttggtcgaaga
gaccactttggctttcccccagagaagccttgggggcctagagattttgatgagagagag
catcgagttctgcctgtctttggtggtccaaaaggcttacatgaagaaagaggtagattt
cgggctggaaattaccgatttgatcctagaagtggtccttggaacagaggatttggtcaa
gaagttcacagagattttgatgaccgcagaagaccctgggagaggcagagggatagggat
gacagagattttgatttctgcagagaaattaatggaaatcgtcttggacgagatagaatt
caaaacacttgggttccccctcctcatgctcgggtttttgattatttcgaaggggccact
tctcaacggaaaggtgataatgtgcctcaagttaatggtgaaaatacagagagacatgct
cagccaccgcctttaccagtacagaaggaccctgaactctatgagaaactggcgtcttca
ggtgacgtagacaaggaggagagcggcacagttgctggtgtagagagtgaagcggtggta
gaaagcacagagactgaggggacataa
DBGET
integrated database retrieval system
