Mus musculus (house mouse): 107932
Help
Entry
107932 CDS
T01002
Symbol
Chd4, 9530019N15Rik, D6Ertd380e, Mi-2beta, mKIAA4075
Name
(RefSeq) chromodomain helicase DNA binding protein 4
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03082
ATP-dependent chromatin remodeling
mmu05165
Human papillomavirus infection
mmu05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107932 (Chd4)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
107932 (Chd4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
107932 (Chd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmu03036
]
107932 (Chd4)
Chromosome and associated proteins [BR:
mmu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
107932 (Chd4)
Chromatin remodeling factors
NuRD complex
107932 (Chd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
ResIII
HDA2-3
PHD-1st_NSD
PHDvar_NSD
HTH_Hrp3
PHD_2
DEAD
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
107932
NCBI-ProteinID:
NP_001333539
MGI:
1344380
Ensembl:
ENSMUSG00000063870
UniProt:
Q6PDQ2
Q8BM83
Q3ULG0
LinkDB
All DBs
Position
6:125073144..125107554
Genome browser
AA seq
1915 aa
AA seq
DB search
MASGLGSPSPCSAGSEEEDMDALLNNSLPPPHPENEEDPDEDLSEAETPKLKKKKKPKKP
RDPKIPKSKRQKKELGDSSGEGPEFVEEEEEVALRSDSEGSDYTPGKKKKKKLGPKKEKK
SKSKRKEEEEEEDEDDDSKEPKSSAQLLEDWGMEDIDHVFSEEDYRTLTNYKAFSQFVRP
LIAAKNPKIAVSKMMMVLGAKWREFSTNNPFKGSSGASVAAAAAAAVAVVESMVTATEVA
PPPPPVEVPIRKAKTKEGKGPNARRKPKGSPRVPDAKKPKPKKVAPLKIKLGGFGSKRKR
SSSEDDDLDVESDFDDASINSYSVSDGSTSRSSRSRKKLRTAKKKKKGEEEVTAVDGYET
DHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKEDN
SEGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGE
WLCPRCTCPALKGKVQKILIWKWGQPPSPTPVPRPPDADPNTPSPKPLEGRPERQFFVKW
QGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNKDPKFAE
MEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEIQDYDLF
KQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDATGGTLH
PYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTI
INWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHV
LLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQN
NLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMP
SKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPV
AAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLE
HEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSD
WNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVVRPGLGSKT
GSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDRNQDETED
TELQGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEESVDPDYWEKLLRHHYEQQQE
DLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQSDNQSDYSVASEEGDEDFDERSEAPRRP
SRKGLRNDKDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRYGMPPQDAFTTQWLVRD
LRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLIRKKVQ
EFEHVNGRWSMPELAEVEENKKMSQPGSPSPKTPTPSTPGDTQPNTPAPVPPAEDGIKIE
ENSLKEEESTEGEKEVKSTAPEATVECAQPPAPAPATAPATATAPEDDKAPAEPPEGEEK
VEKAEVKERTEEPMETEAKGTTEVEKVEEKSAVDLTPIVVEDKEEKKEEEEKKDVMLQNG
ETPKDLSDEKQKKNSKQRFMFNIADGGFTELHSLWQNEERAATVTKKTYEIWHRRHDYWL
LAGIINHGYARWQDIQNDPRYAILNEPFKGEMNRGNFLEIKNKFLARRFKLLEQALVIEE
QLRRAAYLNMSEDPSHPSMALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQL
EELLSDMKADVTRLPATIARIPPVAVRLQMSERNILSRLANRAPEPPPQQVAQQQ
NT seq
5748 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgggcctgggctccccgtccccctgctcagcgggcagtgaggaggaggatatg
gacgcacttctgaacaacagcctgcccccaccccatccagaaaatgaggaagacccagac
gaggatttatccgaagcagagactccaaagctcaagaagaagaaaaagcctaagaaacct
cgagaccctaaaatccctaagagcaagcgccaaaaaaaggagctgggggacagctctggg
gaggggccagagtttgtggaggaggaggaagaggtggctctgcgctcagacagtgagggc
agcgactatactcctggcaagaagaagaaaaagaagctcggacctaagaaagagaagaag
agcaaatccaagcggaaggaggaggaggaagaggaggacgaggatgatgactcgaaggaa
cctaagtcatcagcccagcttttagaagactggggtatggaagacatcgaccatgtgttc
tcagaggaggattatcggaccctcaccaactacaaggccttcagccaatttgttagaccc
ctgattgctgctaaaaaccccaagattgctgtctccaagatgatgatggtcttgggtgca
aagtggagggaattcagtaccaacaaccccttcaagggcagctccggagcatcagtggca
gctgcggcggcggcggctgtggctgtggttgagagcatggtgacagctactgaagtcgcc
cctccccctccccctgtggaggtgccgatccgcaaggccaagaccaaggagggcaaaggt
cccaatgctcggaggaagccgaaaggcagcccgcgagtgcctgacgccaagaagcccaaa
cccaagaaagtagctcctctgaagatcaagctgggagggttcggctccaagcggaagaga
tcctcgagtgaggacgacgatttagatgtagagtctgacttcgacgatgccagtatcaac
agctattctgtttcggatggttccaccagccgcagtagtcggagccgtaagaaactccgg
accgctaaaaagaaaaagaaaggcgaggaggaggtgactgctgtggatggttatgagaca
gaccaccaggactattgcgaggtgtgccagcaaggcggcgagatcatcctgtgtgatacc
tgtccccgagcctaccatatggtgtgcctggacccagacatggagaaggccccggagggc
aagtggagctgtccgcactgtgagaaggaggggatccagtgggaagctaaggaggacaat
tctgagggtgaggagattctggaagaagtcgggggggacccagaagaggaggatgaccat
cacatggaattctgtcgcgtctgcaaggacggcggggagctcctgtgctgtgacacatgc
ccttcttcctaccacatccactgcctgaaccccccgctgccagagatcccaaacggcgaa
tggctctgtccccgctgtacttgtccagctcttaagggcaaagtgcagaagatcctaatt
tggaagtggggccagccaccgtctcccacaccagtgcctcggcctccagatgctgaccct
aataccccgtcgcccaagcccttggaggggcggccagagaggcagttctttgtgaaatgg
caaggcatgtcttactggcactgctcctgggtgtcagaactgcagttggagctgcactgt
caggtgatgttcagaaactaccagcggaagaatgatatggacgagccgccttctggggac
tttggtggagatgaagagaagagccggaagcgaaagaacaaggaccctaagtttgcagag
atggaagagcgcttctaccgctatggaataaaaccggagtggatgatgatccaccgcatc
ctcaaccacagtgtggacaagaagggccacgttcactatttaatcaagtggcgagacctg
ccctatgaccaggcgtcctgggagagcgaggacgtggagattcaggactacgacctgttc
aagcagagctactggaaccacagggagttaatgaggggtgaagaaggacgacccggcaag
aagcttaagaaggtgaagctacggaaactggaaaggcctccggagaccccaactgttgat
cccaccgtgaagtatgagcgacagccggagtatctggatgcgacgggtggaaccctgcat
ccctaccaaatggaaggcttaaactggctccgcttctcctgggctcagggaaccgatact
atcttggctgatgagatgggccttgggaaaactgtgcagacagcagtcttcctctactcc
ctctataaggagggtcactccaaaggccccttcttagtgagcgctcctctgtccaccatc
atcaactgggagagagagtttgagatgtgggctcctgatatgtatgtggtaacctatgtg
ggtgacaaggacagccgtgccatcatccgggaaaatgagttctcctttgaagacaatgcc
attcgtggtggcaagaaggcctcgaggatgaagaaagaagcatcggtgaaattccatgtt
ctgctgacatcctatgagttgatcaccattgatatggccatcttgggttctattgactgg
gcctgcctcattgtggatgaagcccatcggctgaagaacaaccagtctaagttctttcga
gttttgaatggttactcactccagcacaagctgttgctaactggaactccgttacagaac
aatctagaggaactgtttcatctgctcaactttctcacccctgagaggttccacaactta
gaaggcttcttggaggagtttgcagacattgccaaagaggaccagattaaaaaactccac
gacatgctggggcctcatatgttgcggcggctcaaagctgacgtcttcaagaatatgcca
tccaagacagagctgattgtgcgcgtggagttgagtcctatgcagaagaagtactacaag
tatattctcacgcggaatttcgaagcacttaatgctcgaggtggtggcaaccaggtttct
ctgctgaacgtggtgatggatcttaagaaatgctgcaaccacccttatctcttccctgtg
gcagcaatggaagcccctaagatgcctaatggtatgtatgatggcagtgccctaatcaga
gcatctgggaagttgttgctgctgcagaagatgcttaagaacctgaaagagggagggcat
cgtgtgctcatcttctcccagatgaccaagatgttggacttgctagaggattttttagaa
catgaaggttataaatatgaacgtattgatggtggaatcactgggaacatgcgtcaggag
gccattgatcgcttcaatgcaccgggtgctcaacagttctgcttcttgctttccactcga
gctgggggccttgggatcaatctggccactgcggacacagttattatatatgactctgac
tggaacccccataatgacatccaggcctttagcagagcccaccgtattgggcaaaataag
aaggtgatgatctaccggtttgtgacccgtgcatcagtggaggagcgcatcacgcaggtg
gcaaagaagaagatgatgctgacacatttagtggtacggcctggcctgggctccaagaca
ggctcaatgtctaaacaggagcttgatgatatcctcaaatttggcactgaggagctattc
aaggatgaagccacggatggaggaggagacaacaaggagggagaagacagcagtgttatc
cactatgacgataaggccattgaacgactgctggatcgaaaccaggatgagactgaagac
acagaattgcagggcatgaatgaatatttgagctcattcaaagtggctcagtatgtggta
cgggaagaagagatgggggaggaagaggaggtagaacgggaaatcataaaacaggaagaa
agtgtggatcctgactactgggagaaattgctgcggcaccattatgagcagcagcaagaa
gatctagcccgaaatctgggcaaaggaaaaagaatccgtaaacaggtcaactacaatgat
ggctcacaggaggaccgagattggcaggacgaccagtccgacaaccagtccgattactca
gtggcctcagaggaaggtgatgaagactttgacgaacggtcagaagctccccgcaggccc
agtcgcaagggcctgcggaatgataaagataagccattacctcctctgttggcccgtgtt
ggtgggaatattgaagtacttggttttaatgctcgtcagcgaaaagcatttcttaatgca
attatgcgatatggcatgccacctcaggatgcttttaccactcagtggcttgtgagagat
cttcgaggcaagtcagagaaagaatttaaggcttatgtgtcactcttcatgcgacatttg
tgtgagcctggggcagatggggctgagacctttgctgatggcgtcccacgagaaggcctg
tctcgtcaacatgttctcactaggatcggtgtcatgtctctgattcgaaagaaggttcag
gagtttgaacatgttaatggacgctggagcatgcccgaactggctgaagtagaggaaaac
aaaaaaatgtctcagccaggttcaccttctccaaagactcctacaccttccacaccaggg
gacacacaacccaatactcctgcgcctgtgccacctgctgaggatgggataaaaatagag
gaaaatagccttaaagaagaagagagcacagaaggagagaaggaagttaaatctacagcc
cctgaggcgactgtggagtgtgcacagccccctgcccctgcccctgccactgcccctgcc
actgccactgcccctgaggatgacaaggctcctgctgagcctcctgagggggaggaaaaa
gtggaaaaggcagaggtgaaggagagaacagaggagcctatggagacagaggccaaaggt
actactgaggtggagaaagtggaggagaagtctgcggtagacctgaccccgatcgtggtg
gaagacaaagaagagaagaaggaggaggaggagaaaaaggacgtgatgcttcagaatgga
gaaactcccaaggatcttagtgatgagaagcagaagaaaaacagcaaacagcgtttcatg
ttcaacattgcagatggtggttttactgagttgcactcactgtggcagaatgaagagcgg
gcagccacagtcactaagaagacttacgagatctggcaccgtcgccatgattactggctg
ctggctggcattataaaccacggctatgcccggtggcaggacatccagaatgacccacgg
tatgccatcctcaatgagcctttcaagggtgaaatgaatcgtggcaattttctagagatc
aagaataaatttttagctcgaagattcaagctcttagaacaagccctggtgatcgaggag
cagcttcgcagggcagcttacctgaacatgtccgaggacccctctcacccgtctatggcc
cttaacacccgcttcgctgaggtggagtgtttggcagaaagtcaccagcacctgtccaag
gagtcgatggcagggaataagccggccaatgcagtcctacacaaagtcctgaaacagctg
gaggaactgttgagtgacatgaaagctgatgtgacgcggctcccagccaccattgcccgc
atccccccagtcgctgtgaggttacagatgtcagagcggaacattctcagccgcctggca
aacagggcgccagaacctcccccacagcaggtagcccagcagcagtga
DBGET
integrated database retrieval system
