Mus musculus (house mouse): 110379
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Entry
110379 CDS
T01002
Symbol
Sec13, 1110003H02Rik, Sec13l1, Sec13r
Name
(RefSeq) SEC13 homolog, nuclear pore and COPII coat complex component
KO
K14004
protein transport protein SEC13
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03013
Nucleocytoplasmic transport
mmu04141
Protein processing in endoplasmic reticulum
mmu04150
mTOR signaling pathway
mmu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110379 (Sec13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110379 (Sec13)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
110379 (Sec13)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110379 (Sec13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
110379 (Sec13)
04131 Membrane trafficking [BR:
mmu04131
]
110379 (Sec13)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110379 (Sec13)
Membrane trafficking [BR:
mmu04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
110379 (Sec13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
110379 (Sec13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
110379 (Sec13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
EIF3I
WD40_Gbeta
ANAPC4_WD40
Beta-prop_WDR41
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_EML
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
110379
NCBI-ProteinID:
NP_077168
MGI:
99832
Ensembl:
ENSMUSG00000030298
UniProt:
Q9D1M0
LinkDB
All DBs
Position
6:complement(113705013..113717642)
Genome browser
AA seq
322 aa
AA seq
DB search
MVSVMNTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHSGHDSSVNSVCWAPHDYGLIL
ACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIK
KFASGGCDNLIKLWREEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV
FIWTCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCI
SDVNKGQGSVSASITEGQQNEQ
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcagtaatgaacactgtggacacctctcatgaggacatgattcatgatgcacag
atggactactacggcacccgcctagcaacctgctcctcggataggtccgtcaaaattttc
gatgtgcggaatggagggcagatcctcatcgcagacctcagaggacatgaggggccagta
tggcaagtggcctgggcccaccccatgtatggcaatatcctggcctcctgttcctatgac
cggaaagtcatcatctggaaggaggaaaacggcacttgggagaagacccatgagcactcg
ggacacgactcctcagtgaactctgtttgctgggcccctcatgactatggcctgatcctg
gcctgtgggagttcagatggggccatctcactgctgacctatacaggggaaggccagtgg
gaagtgaagaagattaacaatgctcacacgattggctgtaatgctgtcagttgggcccca
gcagttgtgcctggaagccttatagaccaaccatcagggcagaaacccaattacatcaag
aagtttgcatcaggtggctgtgacaacctcatcaagctatggagggaagaggaggatggc
cagtggaaggaggagcagaagctagaggcacacagcgactgggtccgagatgttgcctgg
gccccctccattggcttgcccaccagcaccattgccagctgctctcaggatggtcgagtg
tttatttggacctgtgacgatgcctcaggcaatatgtggtcacctaaactcctacacaag
ttcaatgatgttgtgtggcacgtgagctggtccatcacagccaacatcctggctgtgtca
ggtggagacaataaggtgaccctgtggaaagagtcggtggacggacagtgggtgtgcatc
agtgacgtcaacaagggccagggttctgtgtcagcctccatcacagagggccaacagaac
gagcagtga
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integrated database retrieval system
