| Entry |
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| Symbol |
Abca1, ABC-1, Abc1
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| Name |
(RefSeq) ATP-binding cassette, sub-family A member 1
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| KO |
| K05641 | ATP-binding cassette, subfamily A (ABC1), member 1 |
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| Organism |
mmu Mus musculus (house mouse)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:mmu00001]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
11303 (Abca1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
11303 (Abca1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
11303 (Abca1)
04979 Cholesterol metabolism
11303 (Abca1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
11303 (Abca1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:mmu02000]
11303 (Abca1)
Transporters [BR:mmu02000]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
11303 (Abca1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
4:complement(53030789..53159988)
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| AA seq |
2261 aa
MACWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVVGNFNKSIVSRLFSDAQRLLLYSQRDT
SIKDMHKVLRMLRQIKHPNSNLKLQDFLVDNETFSGFLQHNLSLPRSTVDSLLQANVGLQ
KVFLQGYQLHLASLCNGSKLEEIIQLGDAEVSALCGLPRKKLDAAERVLRYNMDILKPVV
TKLNSTSHLPTQHLAEATTVLLDSLGGLAQELFSTKSWSDMRQEVMFLTNVNSSSSSTQI
YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNNTEEDVDTFYDNSTTPYCNDLMK
NLESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDLEGMWEELS
PQIWTFMENSQEMDLVRTLLDSRGNDQFWEQKLDGLDWTAQDIMAFLAKNPEDVQSPNGS
VYTWREAFNETNQAIQTISRFMECVNLNKLEPIPTEVRLINKSMELLDERKFWAGIVFTG
ITPDSVELPHHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVV
EQAIIRVLTGSEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKSIV
YEKEARLKETMRIMGLDNGILWFSWFVSSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFV
FLSVFAMVTILQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFSIKIFAS
LLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPVEEDGFNLTTAVSMMLFDTFLYGVMTW
YIEAVFPGQYGIPRPWYFPCTKSYWFGEEIDEKSHPGSSQKGVSEICMEEEPTHLRLGVS
IQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRSEMSSIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVG
LPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLS
SCRNSSSTVSCLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVSEARLVEDI
GHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVDAE
TSDGTLPARRNRRAFGDKQSCLHPFTEDDAVDPNDSDIDPESRETDLLSGMDGKGSYQLK
GWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQ
PWMYNEQYTFVSNDAPEDMGTQELLNALTKDPGFGTRCMEGNPIPDTPCLAGEEDWTISP
VPQSIVDLFQNGNWTMKNPSPACQCSSDKIKKMLPVCPPGAGGLPPPQRKQKTADILQNL
TGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGVSNSQALPPSHEVNDAIKQMKK
LLKLTKDSSADRFLSSLGRFMAGLDTKNNVKVWFNNKGWHAISSFLNVINNAILRANLQK
GENPSQYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQER
VSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLAL
LLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNDIN
DILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEG
VVFFLITVLIQYRFFIRPRPVKAKLPPLNDEDEDVRRERQRILDGGGQNDILEIKELTKI
YRRKRKPAVDRICIGIPPGECFGLLGVNGAGKSTTFKMLTGDTPVTRGDAFLNKNSILSN
IHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYGEK
YASNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIVKEGRSVVLT
SHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEFFG
LAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFVNF
AKDQSDDDHLKDLSLHKNQTVVDVAVLTSFLQDEKVKESYV |
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| NT seq |
6786 nt +upstreamnt +downstreamnt
atggcttgttggcctcagttaaggctgctgctgtggaagaatctgacatttcgaaggaga
caaacatgtcagctgttactggaagtggcctggcctctctttatcttcctgatcctgatc
tctgtacgcctgagctacccaccctacgaacaacatgagtgccactttccgaataaagcc
atgccgtctgcaggaaccctcccctgggtacaggggattatctgtaatgccaacaacccc
tgcttccgttatccaactcccggcgaggctcccggtgttgttggaaactttaacaagtcc
atcgtgtctcgcctgttctcagacgctcagaggcttcttctgtacagccaaagagatacc
agcattaaggacatgcacaaggtcctgagaatgttacggcagatcaagcatcccaactca
aatttgaagctccaggattttctggtggacaatgaaacattctctggattcctgcagcac
aatttgtcccttccaagatctactgtggacagcctgctgcaggcgaatgttggtctccag
aaggtatttttgcaaggctaccaattacatttggccagtctgtgtaacggatcaaaatta
gaagaaattattcagcttggtgatgcggaagtttctgccctctgtggtctaccgaggaag
aagctcgatgcagccgagagagtactgcgctacaacatggacatcctgaagccagttgtg
acaaaactaaattccacatctcatctcccgacccagcatctggctgaagccaccacagtg
ttgcttgacagcttggggggcctggcccaagagctgttcagcacaaagagctggagcgac
atgcggcaggaggtgatgtttctgaccaacgtgaacagctccagctcctccacccagatc
taccaggcagtgtcccgcatcgtgtgtggtcacccagagggtgggggcctgaagatcaag
tccctcaactggtacgaggataacaactacaaagccctctttggagggaataacaccgag
gaagacgtggacaccttctatgacaattctacaactccttattgcaatgatttgatgaag
aacttggagtctagtcctctttctcgaattatttggaaggcactcaagccactgcttgtt
ggaaagattctctatacacctgacacaccagctacaaggcaggtcatggctgaggtgaac
aagacctttcaggagttggctgtgttccatgacctggagggcatgtgggaagaactcagc
ccccaaatttggaccttcatggagaacagccaagagatggaccttgtccggacgctgtta
gacagcagaggcaatgaccagttttgggaacagaagttggatggattagattggactgcc
caagacatcatggcgtttctggccaagaacccagaagatgttcagtccccaaatggctct
gtgtatacctggagagaagctttcaatgagaccaaccaggcaatccagacgatatctcga
ttcatggagtgtgtcaacctgaacaagctggaacccattccgacagaagtcaggctcatc
aacaagtccatggagctgctggacgagaggaagttctgggctggcatcgtgttcacaggc
atcactccagatagtgtggagctgccccatcatgtaaagtacaagatccggatggacatt
gacaacgtggagagaactaataagatcaaggatgggtactgggaccctggtcctcgggct
gacccttttgaagatatgcgctatgtctggggcggcttcgcctacttgcaggatgtggtg
gaacaggccatcatcagagtgctgacgggatctgagaagaaaacgggtgtctacgtgcaa
cagatgccctacccctgttatgttgatgacatttttctgcgggtcatgagccggtcaatg
cccctcttcatgactctagcctggatctactctgtcgctgtgatcatcaagagcattgtg
tatgagaaggaggctcggctgaaggagaccatgcggatcatgggtctggacaatggcatc
ctctggtttagctggtttgttagcagcctcatccctctgcttgtgagcgctggcctgctg
gtggtcatcttgaagttaggaaacctgctgccctatagtgaccccagcgtggtgttcgtc
ttcctgtctgtgtttgccatggtgaccatcctacagtgcttcctcattagcacgctcttc
tcccgtgccaacctggcagcagcctgtgggggcatcatctacttcacgctgtacctgccc
tatgtgctgtgcgtagcctggcaggactatgtgggcttctccatcaagatctttgctagc
ctgctgtctcctgtggcttttggattcggctgtgagtatttcgcccttttcgaggagcaa
ggtatcggggtccaatgggacaatctctttgagagcccggtggaggaggacggcttcaat
ctcaccactgcagtgtccatgatgctctttgacacctttctctatggcgtgatgacatgg
tacatcgaagccgtctttccaggacagtatggaattcccaggccctggtattttccttgt
accaagtcatactggtttggtgaggaaattgatgagaagagccaccctggttccagccag
aagggagtgtcagaaatctgcatggaagaggaacccactcatctgaggctgggggtgtcc
attcagaacctggtgaaggtttaccgagatggcatgaaggttgctgtggatggcttggcg
ctcaacttttacgaaggccagattacctccttcctgggccacaatggagcagggaagacc
accaccatgtcaatactgactgggctgtttcccccaacttctggcacggcctacatcctg
gggaaggacattcgctcggagatgagctccatccggcagaacctgggagtctgtccccag
cataatgtgctgtttgacatgctgactgtcgaagagcacatctggttctatgcgcgccta
aaggggctctcagagaagcacgtgaaagcagagatggagcagatggccctggatgttggc
ttacccccgagcaagctgaaaagcaaaacgagtcagctctcaggtgggatgcagagaaag
ctgtctgtggccttggccttcgtgggtggatccaaggttgtcattctggacgagcccaca
gccggggtggacccgtactctcgcaggggaatatgggaactcctgctaaaataccggcaa
ggccgcaccattattttgtctacacaccacatggacgaagctgacatccttggggacaga
attgccatcatttcccatgggaagctgtgttgtgtgggctcctccctgtttttgaaaaac
cagttgggaacgggttactatctgaccctggttaagaaagatgtggaatcgtccctcagt
tcctgcagaaacagtagcagcaccgtgtcttgtctgaaaaaggaggacagtgtttctcag
agcagttctgatgctggcctgggcagcgaccatgaaagtgacacgctgaccatcgatgtc
tctgctatctccaacctcatcaggaagcacgtgtctgaagcccggctggtggaggacatt
gggcacgagctgacctatgtgctgccgtacgaagccgcgaaggagggagcctttgtggaa
ctcttccatgagattgatgaccggctctcagacctgggcatctccagttatggcatctcg
gagaccaccctggaagaaatattcctcaaagtggctgaagagagcggggtggatgctgag
acctcagatggtactttgccagcaagacgaaacagacgggccttcggggacaagcagagc
tgtctgcacccatttacggaagatgatgctgttgatcccaatgactctgacatagaccca
gaatccagggagaccgacctgctcagtgggatggacggcaaaggctcctaccagctgaag
ggctggaaactcacccagcaacagtttgtggcccttttgtggaagaggctgctgattgcc
agacggagccggaagggtttctttgctcagattgtcctgccagctgtctttgtttgcatt
gccctggtcttcagcctgattgtgccaccctttggcaagtaccccagcctggaacttcag
ccctggatgtataatgagcagtatacatttgtcagtaatgatgctcccgaggacatgggc
acccaggaactcctgaatgctctgaccaaagatccaggctttgggacccgctgtatggaa
ggaaacccaatcccagataccccttgcttggctggggaggaggactggaccatcagcccc
gtcccccagagcatcgtggacctcttccagaatggaaactggaccatgaagaacccctca
cctgcgtgccagtgtagcagtgacaaaatcaagaagatgctgcctgtgtgtcccccaggg
gcaggggggctgccacctcctcagagaaaacagaaaaccgcagacatccttcagaatctg
acaggaagaaatatttcagattacctggtgaagacgtacgtgcagatcatagcaaagagc
ttaaagaataagatctgggtgaacgagtttcggtatggcgggttttccctgggtgtcagt
aattctcaagcacttcctccgagccatgaagttaatgatgctatcaagcaaatgaagaaa
ctcctgaagctgaccaaggacagctccgcagatcgcttcctcagcagcctgggaaggttc
atggcagggctggatacgaaaaacaatgtcaaggtgtggttcaataacaagggctggcat
gctatcagttcgttcctgaatgtcatcaacaatgccattctccgggccaacctgcagaag
ggagagaacccgagccagtatggaatcactgctttcaaccaccccttgaacctcactaaa
cagcagctctcagaggtggctctgatgaccacctctgtcgacgtcctcgtgtctatctgt
gtcatctttgcgatgtcctttgtccctgccagctttgttgtgttcctgatccaggagcgt
gtgagcaaagccaagcatcttcagttcatcagcggcgtgaagcctgtcatctactggctg
tccaattttgtctgggatatgtgcaattatgtggtccctgctacactggtcattatcatc
ttcatctgcttccagcagaagtcctatgtgtcctctaccaacctgcccgttctagccctt
ctgctcttgctgtatgggtggtcgatcactcctctcatgtatccagcatcctttgtgttc
aagatccccagcaccgcctatgtggttctcaccagtgtgaacctcttcatcggcatcaat
ggcagtgtggccactttcgtactggagctgtttacaaacaataagctcaatgacatcaat
gacatcctgaagtctgtgtttcttatcttcccacatttttgcctggggcgagggctcatc
gacatggtgaagaaccaggccatggccgatgccctggagaggtttggggagaaccgcttc
gtctctccgctctcttgggacttggtaggacggaacctttttgccatggccgtggaaggg
gtggtgttcttcctcattactgttctgatccagtacagatttttcatcaggcccagacct
gtaaaggcgaagcttcctcctttgaatgacgaggatgaggatgtgaggcgggagagacag
aggattctggacggtggcggacagaatgacatcctagagatcaaggaactgaccaagatc
tataggaggaagcggaagcctgcagtcgacaggatctgcatcggcatccctcccggagag
tgctttggactcctgggagttaacggagctgggaagtcaacaactttcaagatgctgact
ggagacacccctgtgaccagaggggatgcgttccttaacaaaaacagcatcttatcaaat
atccatgaagtacaccagaacatgggctactgccctcagtttgacgccatcacagagctg
ctgacgggaagagagcatgtggagttctttgccctcctgaggggagtcccagaaaaggaa
gttggcaaggttggtgaatgggcaattcgcaaactgggcctggtaaagtatggagaaaaa
tatgccagtaactacagtggcggcaacaaacgaaagctctccacagccatggctttgatt
ggcggacctcctgtggtgtttctggatgaaccaaccacaggcatggaccctaaagcccgg
agattcttgtggaattgtgccctaagcattgtcaaggaggggagatctgtagtccttaca
tctcatagtatggaagaatgtgaagctctttgtacaaggatggccataatggtcaatgga
aggttcaggtgccttggcagtgtccaacatctgaaaaacaggtttggagatggttataca
atagttgtacgaatagcaggctccaaccctgacctgaagcctgtccaggagttctttgga
cttgcgtttccgggaagtgtcctaaaagagaaacatcgaaacatgcttcagtaccagctt
ccatcctccttgtcatctctagccaggatattcagcatcctctcccagagcaaaaagcga
ctccacatagaagactactctgtctctcagacaacacttgaccaagtatttgtgaacttt
gccaaggaccaaagtgatgatgaccacttaaaggacctgtcactgcacaaaaaccagaca
gttgtggatgtggccgttctcacatcctttttgcaggatgagaaagtgaaagaaagttat
gtatga |
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