Mus musculus (house mouse): 12180
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Entry
12180 CDS
T01002
Symbol
Smyd1, 4632404M21Rik, Bop, Zmynd18
Name
(RefSeq) SET and MYND domain containing 1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu00310
Lysine degradation
mmu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
12180 (Smyd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmu03036
]
12180 (Smyd1)
Enzymes [BR:
mmu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
12180 (Smyd1)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
12180 (Smyd1)
Chromosome and associated proteins [BR:
mmu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
12180 (Smyd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-MYND
SET
TPR_12
DUF3369
FRG1
Motif
Other DBs
NCBI-GeneID:
12180
NCBI-ProteinID:
NP_001153599
MGI:
104790
Ensembl:
ENSMUSG00000055027
UniProt:
P97443
Structure
PDB
PDBj
LinkDB
All DBs
Position
6:complement(71190924..71239265)
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AA seq
490 aa
AA seq
DB search
MTIGSMENVEVFTSEGKGRGLKATKEFWAADVIFAERAYSAVVFDSLINFVCHTCFKRQE
KLHRCGQCKFAHYCDRTCQKDAWLNHKNECAAIKKYGKVPNENIRLAARIMWRVEREGTG
LTEGCLVSVDDLQNHVEHFGEEEQKELRVDVDTFLQYWPPQSQQFSMQYISHIFGVINCN
GFTLSDQRGLQAVGVGIFPNLGLVNHDCWPNCTVIFNNGNHEAVKSMFHTQMRIELRALG
KISEGEELTVSYIDFLHLSEERRRQLKKQYYFDCSCEHCQKGLKDDLFLAAKEDPKPSQE
VVKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEV
LSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAY
AILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAALNNQPMQVMAEPSNE
PAPALFHKKQ
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgacaataggcagcatggagaacgtggaggtcttcacttccgagggcaaaggcagaggt
ctgaaggctacgaaggagttctgggctgcggatgtcatctttgcggagagggcttattct
gcagtggtttttgacagcctcattaacttcgtgtgccacacctgcttcaagaggcaggag
aagctccatcgctgcgggcagtgcaagttcgcccattactgcgaccgcacgtgccagaag
gatgcttggctgaatcacaagaacgagtgcgctgccatcaagaaatatgggaaagtgccc
aacgagaacatcaggctggccgcccgcatcatgtggcgggtggagagagagggcactggg
ctcacagagggctgcctggtgtccgtggatgacttacagaaccacgtggagcactttggg
gaggaggagcagaaggaactccgagtagacgtggacacgttcttgcagtactggccacca
cagagccagcagttcagcatgcagtatatctcacacatctttggtgtgatcaactgcaac
ggtttcactctcagtgaccagagagggctacaggcagtaggtgtgggcatcttccccaac
ctgggcctggtgaaccatgattgctggccaaactgcactgtcatattcaacaatggcaat
catgaggcagtgaaatccatgtttcacacgcagatgaggattgagctccgggccctgggc
aagatctcagaaggcgaggagctgactgtgtcctacatagacttcctgcacctcagtgag
gagcgcaggcggcagctgaagaaacagtactactttgactgctcctgtgagcactgccag
aaggggctgaaggacgacctcttcctggcagcgaaggaagaccccaagccctcccaggaa
gtggtgaaggagatgatacaattctcaaaggatacactggaaaaaatagacaaggctcgc
tccgagggtttgtatcacgaggttgtgaagctgtgtcgggagtgcctggagaagcaggag
ccagtgttcgccgacaccaacctctacgtgcttcggctgctcagcattgcatcagaggtc
ctctcctacctccaggcctatgaggaggcctcacattatgccaggaggatggttgatggc
tacatgaaactctaccaccataacaatgcccaactgggcatggctgtgatgagggcaggg
cttaccaactggcatgctggtcacatcgaagtggggcatgggatgatctgcaaagcctat
gctattctcctggtgacccatggaccctcccaccctatcaccaaagacttagaggccatg
cggatgcagacagagatggagctgcgtatgttccgccaaaacgaattcatgtatcacaag
atgcgagaggctgccctgaacaaccagcccatgcaggtcatggctgagcctagcaatgaa
ccagcccccgctctgttccataagaagcagtga
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integrated database retrieval system
