Mus musculus (house mouse): 12336
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Entry
12336 CDS
T01002
Symbol
Capns1, Capa-4, Capa4, Capn4, Cdps, Css1, D7Ertd146e
Name
(RefSeq) calpain, small subunit 1
KO
K08583
calpain, small subunit 1
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mmu01002
]
12336 (Capns1)
Peptidases and inhibitors [BR:
mmu01002
]
Cysteine peptidases
Family C2: calpain family
12336 (Capns1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
NCD2
PMBR
Motif
Other DBs
NCBI-GeneID:
12336
NCBI-ProteinID:
NP_033925
MGI:
88266
Ensembl:
ENSMUSG00000001794
UniProt:
O88456
LinkDB
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Position
7:complement(29886359..29898308)
Genome browser
AA seq
268 aa
AA seq
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MFLVNSFLKGGGGGGGGGGLGGGLGNVLGGLISGAAGGGGGGGGGMGLGGGGGGGGTAMR
ILGGVISAISEAAAQYNPEPPPPRSHYSNIEANESEEVRQFRKLFVQLAGDDMEVSATEL
MNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQAIYKR
FDTDRSGTIGSHELPGAFEAAGFHLNEHLYSMIIRRYADESGNMDFDNFISCLVRLDAMF
RAFKSLDKNGTGQIQVNIQEWLQLTMYS
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgttcttggtgaattcgttcttgaagggcggcggtggcggtgggggaggcgggggtctg
ggcgggggcctggggaatgtgctcggaggcctgatcagcggagctgctggcggcggcggc
ggtggcggtggaggcatgggactgggaggaggtggcggaggcggtggaactgccatgcgc
atcctgggcggagtcattagcgccatcagcgaggctgctgcgcagtacaacccggagcct
ccgcctccacgtagtcattactccaatattgaggccaacgagagtgaagaagtccgtcag
ttcaggaaactttttgtccagctggctggagacgacatggaggtcagcgccacagaactc
atgaatatcctcaacaaggtcgtgacccgacacccggatctgaaaactgatggttttggc
attgacacttgtcggagcatggtggccgtcatggatagcgacaccacaggcaagctgggc
tttgaggagttcaaatacctctggaacaacattaaaaagtggcaggctatatacaaacgc
tttgatactgaccgatcagggactatcggtagccatgaacttccaggggcctttgaggca
gcaggattccacctgaatgagcatctctacagcatgatcatccggcgctacgcagatgag
agcgggaacatggatttcgataacttcatcagctgcttggtcaggctagatgccatgttc
cgcgctttcaaatctcttgacaaaaatggcaccggacagatccaagtgaacatccaggag
tggctgcagctgactatgtattcctga
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