Mus musculus (house mouse): 12648
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Entry
12648 CDS
T01002
Symbol
Chd1, 4930525N21Rik
Name
(RefSeq) chromodomain helicase DNA binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmu03021
]
12648 (Chd1)
03036 Chromosome and associated proteins [BR:
mmu03036
]
12648 (Chd1)
Transcription machinery [BR:
mmu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
12648 (Chd1)
Chromosome and associated proteins [BR:
mmu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
12648 (Chd1)
SLIK complex
12648 (Chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Chromo
Helicase_C
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
12648
NCBI-ProteinID:
NP_031716
MGI:
88393
Ensembl:
ENSMUSG00000023852
UniProt:
P40201
LinkDB
All DBs
Position
17:15925229..15992874
Genome browser
AA seq
1711 aa
AA seq
DB search
MNGHSDEESVRNGSGESSQSGDDCGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSDSGS
QSESESDTSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAMLRKQPQQAQQQRPASSNSG
SEEDSSSSEDSDDSSSGAKRKKHNDEDWQMSGSGSPSQSGSDSESEEERDKSSCDGTESD
YEPKNKVRSRKPQNRSKSKNGKKILGQKKRQIDSSEDEDDEDYDNDKRSSRRQATVNVSY
KEDEEMKTDSDDLLEVCGEDVPQPEDEEFETIERVMDCRVGRKGATGATTTIYAVEADGD
PNAGFERNKEPGDIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRW
LKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGLPDYYCKWQGLPYSECS
WEDGALISKKFQTCIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLELR
DYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTL
TSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAF
LGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMP
EKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQ
KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH
LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL
RKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG
QKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNK
EELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLSVGDELLSQFKVA
NFSNMDEDDIELEPERNSKNWEEIIPEEQRRRLEEEERQKELEEIYMLPRMRNCAKQISF
NGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFG
GPLERLDAIARDAELVDKSETDLRRLGELVHNGCVKALKDSSSGTERAGGRLGKVKGPTF
RISGVQVNAKLVIAHEDELIPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLL
IGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSRDLAKREA
QRLCGAGGSKRRKTRAKKSKAMKSIKVKEEIKSDSSPLPSEKSDEDDDKLNDSKPESKDR
SKKSVVSDAPVHITASGEPVPIAEESEELDQKTFSICKERMRPVKAALKQLDRPEKGLSE
REQLEHTRQCLIKIGDHITECLKEYSNPEQIKQWRKNLWIFVSKFTEFDARKLHKLYKHA
IKKRQESQQNSDQNSNVATTHVIRNPDMERLKENTNHDDSSRDSYSSDRHLSQYHDHHKD
RHQGDSYKKSDSRKRPYSSFSNGKDHREWDHYRQDSRYYSDREKHRKLDDHRSREHRPSL
EGGLKDRCHSDHRSHSDHRMHSDHRSSSEHTHHKSSRDYRYLSDWQLDHRAASSGPRSPL
DQRSPYGSRSPFEHSAEHRSTPEHTWSSRKT
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagtgatgaagaaagtgttagaaatggcagcggagaatcaagtcagtca
ggtgatgattgtgggtcagcatcaggctctggatctggctcgagttctggcagcagcagt
gacggaagcagcagccaatccgggagcagcgactctgattctggctctgactcaggaagt
caatcagagtctgaatcagacacatcccgagagaacaaggttcaagcaaaaccaccaaaa
gtcgacggagccgagttttggaaatctagccccagtattctggctgtccagagatctgca
atgcttaggaagcagccacagcaggcccagcagcagcgcccagcttcatctaatagtgga
tccgaagaagactcgtccagcagtgaagactccgacgactcgtccagcggtgccaagagg
aagaagcacaatgatgaagactggcagatgtctgggtccggatctccatctcagtctggt
tcagactcagaatctgaagaagagcgagataaaagcagctgcgacgggacagagtccgac
tacgagccgaaaaacaaagtcagaagccgaaagcctcagaatagatctaagtcaaaaaat
gggaaaaaaattcttggacaaaaaaagagacagattgattcatctgaggatgaagatgat
gaagattatgataatgataaacgaagctctcgccgccaagccaccgtcaatgtgagctac
aaggaggatgaagaaatgaaaaccgactccgatgacctgctggaggtctgcggcgaggac
gtccctcagcctgaggacgaggagtttgagacaatagagagggttatggattgcagagtg
gggcggaaaggagctactggtgctactacaaccatttatgctgtcgaagcagatggtgac
ccaaatgcaggatttgaaagaaacaaagagccaggagacatacagtatttaattaagtgg
aaaggatggtctcacatccacaacacatgggagacagaagagaccctgaagcagcagaac
gttagagggatgaaaaaattggataattataagaaaaaagatcaagagacgaaacgatgg
ctgaaaaatgcttctccagaagatgtggaatattataattgccagcaagagcttacagat
gatctacacaaacagtatcagatagtggagcgcataattgctcattccaatcaaaaatca
gcagctggtcttcctgattattattgcaaatggcaggggcttccatactcagagtgcagc
tgggaggatggagctctcatttccaaaaagtttcagacatgcatcgatgaatattttagc
aggaatcagtcaaaaacgacaccttttaaagattgcaaagtattgaaacaaagaccaaga
tttgtagctctgaagaaacaaccatcctatattggaggacatgagggcttagaactgaga
gactatcagctgaatggtttaaactggctcgctcactcttggtgcaaaggaaatagttgc
atacttgctgatgaaatgggccttgggaaaacaatacagacgatctcatttttgaactat
ttgttccatgaacatcagttatatgggccgtttctactagttgtcccgctctccactctg
acttcctggcagagggagatacagacgtgggcgtctcagatgaatgctgtggtttactta
ggcgacattaacagcagaaacatgataagaactcatgaatggatgcatccccagaccaaa
cggttaaaatttaatatacttttaacaacgtatgaaattttattgaaggataaggcattc
cttggtggtctgaattgggcattcataggtgttgatgaagcgcatcgattaaagaatgat
gattcccttctgtacaaaactttaatcgactttaaatctaaccatcgccttctgatcact
ggaacccctctacagaactccctgaaggagctctggtcactgctgcacttcattatgccg
gagaagttttcttcatgggaagattttgaagaagaacatggcaaaggcagagaatatggt
tatgcaagcctccacaaggagcttgagccatttctgttacgcagagttaagaaagatgtg
gaaaaatctcttcctgccaaggtggagcagattttaagaatggagatgagtgctttacag
aagcaatattacaagtggattttaactaggaattataaagccctcagcaaaggttccaag
ggcagtacctcaggctttttgaacattatgatggagctaaagaaatgttgtaaccattgc
tacctcattaaaccaccagataataatgaattctataataaacaggaggccttacaacac
ttaatccgtagtagcggaaaactcatccttctcgacaagctgttgattcgcctaagagaa
agaggcaaccgagtgctcattttctctcagatggtgcggatgttagacatactcgcagag
tatttgaagtaccgccagttcccctttcaaagattagatggatcgataaaaggggagctg
aggaagcaggctttggatcactttaatgccgagggctcagaggatttctgctttttgctt
tctacccgagctgggggtttaggcattaacctagcctctgctgacaccgttgttatattc
gattctgattggaatccacaaaatgatcttcaggctcaggcaagagctcaccgaattgga
cagaagaaacaggtgaatatatatcgcttggttacaaagggatcagttgaagaagatatt
cttgaaagggccaaaaagaaaatggttttggatcatcttgttattcaaagaatggatacc
actgggaagacagtgctgcacacaggctcggctccgtcaagttccacccccttcaataaa
gaggagttatccgccattttaaaattcggtgctgaggagctctttaaggagcctgaagga
gaggagcaggagccacaggaaatggatatcgatgaaatcctgaagagagccgagactcac
gagaacgagccaggcccactgagtgtgggggatgagctgctttctcagtttaaggttgcc
aatttttcaaatatggatgaagatgacattgaattggaacctgaaagaaattcaaagaac
tgggaggagatcattccagaagagcaaagacggcgactagaagaggaggagagacaaaag
gaactggaggaaatttatatgctcccgagaatgagaaactgtgcaaagcagataagtttc
aatggaagtgaagggaggcggagtagaagcaggagatattctggatctgatagtgattca
atctcggaaaggaaacggccgaagaaacgtgggcgaccccgcactatccctcgggagaat
attaaaggatttagtgatgcggagattcggcggtttatcaagagctataagaaatttggt
ggccccctggagaggttagatgcaattgctcgagatgctgaattggttgataagtcagaa
acagatctcagaagactaggagaactggtgcataatggttgtgttaaagctttaaaagac
agttcttcaggaacagagcgagcaggtggcagacttggaaaagtgaaggggccaacattc
cgcatctctggagtccaagtgaatgccaagctggtcattgcccatgaggatgagctgatc
cctctgcataagtccatcccttcggacccggaggagaggaagcagtatacaatcccctgc
catacaaaggctgcgcactttgatatagactggggcaaagaagatgattctaatttgtta
attggtatctatgagtatggctatggaagctgggaaatgattaaaatggatccagacctc
agtttaacacacaagattcttccagatgatcctgataaaaaaccacaagcaaaacagtta
cagacccgtgcagactacctcatcaaactacttagcagagatcttgcaaaaagagaggct
cagagactttgtggtgcgggaggttcaaagaggagaaaaacgagagctaaaaagagtaag
gcaatgaagtccatcaaagtgaaagaggaaataaagagtgactcgtcgcccctgccttca
gagaagtctgacgaggatgacgataaactgaatgactccaagcctgaaagtaaagaccga
tccaaaaagtctgtagtgtccgatgctcccgttcacatcactgcgagtggagagcccgtt
cccatagctgaagagtctgaagagctggatcagaagacattcagtatttgtaaagaaaga
atgagaccggtgaaagcagctttgaaacaacttgacaggcctgagaaaggcctttcagaa
agagagcagctggaacacactagacagtgcttaatcaagatcggagaccatatcactgaa
tgcttgaaggaatattccaatcctgaacaaattaagcagtggaggaaaaacctgtggatt
tttgtatctaagtttactgagtttgatgcaaggaaattacataaattatataagcatgct
attaaaaaacgacaagaatctcagcaaaacagtgaccagaatagcaatgttgctaccact
catgtgattaggaatccagatatggaaaggttaaaagagaatacaaatcatgatgacagt
agcagggacagctattcttctgacagacacttatctcagtaccatgatcatcacaaggac
cgccatcagggagattcttataaaaagagtgactctcggaagagaccctactcctcattt
agcaatggcaaagaccaccgcgagtgggatcactacaggcaagacagcaggtactatagt
gaccgagagaaacacagaaaactggatgaccacaggagtcgagagcacaggccaagtttg
gaaggaggcttaaaggacaggtgtcactctgaccaccgatctcactcggaccatcgaatg
cactcagaccatcgctcaagctccgagcacacacatcataaatcctccagggattatcgg
tatctctcagattggcagttggaccaccgagctgccagcagtggccctaggtcaccttta
gatcagaggtctccatatggctccaggtccccatttgaacattcagctgaacacagaagt
acgcctgaacacacctggagtagtcggaagacatga
DBGET
integrated database retrieval system
