Mus musculus (house mouse): 12753
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Entry
12753 CDS
T01002
Symbol
Clock, 5330400M04Rik, KAT13D
Name
(RefSeq) clock circadian regulator
KO
K02223
circadian locomoter output cycles kaput protein [EC:
2.3.1.48
]
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04710
Circadian rhythm
mmu04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
12753 (Clock)
09159 Environmental adaptation
04710 Circadian rhythm
12753 (Clock)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmu03000
]
12753 (Clock)
03036 Chromosome and associated proteins [BR:
mmu03036
]
12753 (Clock)
Enzymes [BR:
mmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
12753 (Clock)
Transcription factors [BR:
mmu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
12753 (Clock)
Chromosome and associated proteins [BR:
mmu03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
12753 (Clock)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
DUF6080
Motif
Other DBs
NCBI-GeneID:
12753
NCBI-ProteinID:
NP_001276755
MGI:
99698
Ensembl:
ENSMUSG00000029238
UniProt:
O08785
Q8C9W6
Structure
PDB
LinkDB
All DBs
Position
5:complement(76357715..76452675)
Genome browser
AA seq
855 aa
AA seq
DB search
MVFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSM
LPGNARKMDKSTVLQKSIDFLRKHKETTAQSDASEIRQDWKPTFLSNEEFTQLMLEALDG
FFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLLESDSL
TPEYLKSKNQLEFCCHMLRGTIDPKEPSTYEYVRFIGNFKSLTSVSTSTHNGFEGTIQRT
HRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIGYL
PFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYH
QWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSDNRINTVSLKEA
LERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTSTPPRQHLPAHEKMTQRRSSF
SSQSINSQSVGPSLTQPAMSQAANLPIPQGMSQFQFSAQLGAMQHLKDQLEQRTRMIEAN
IHRQQEELRKIQEQLQMVHGQGLQMFLQQSNPGLNFGSVQLSSGNSNIQQLTPVNMQGQV
VPANQVQSGHISTGQHMIQQQTLQSTSTQQSQQSVMSGHSQQTSLPSQTPSTLTAPLYNT
MVISQPAAGSMVQIPSSMPQNSTQSATVTTFTQDRQIRFSQGQQLVTKLVTAPVACGAVM
VPSTMLMGQVVTAYPTFATQQQQAQTLSVTQQQQQQQQQPPQQQQQQQQSSQEQQLPSVQ
QPAQAQLGQPPQQFLQTSRLLHGNPSTQLILSAAFPLQQSTFPPSHHQQHQPQQQQQLPR
HRTDSLTDPSKVQPQ
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttaccgtaagctgtagtaaaatgagctcaattgttgacagagatgacagtagt
atttttgatggattggtggaagaagatgacaaggacaaagcaaaaagagtatctagaaac
aaatcagaaaagaaacgtagagatcagttcaatgtcctcattaaggagctggggtctatg
cttcctggtaacgcgagaaagatggacaagtctactgttctacagaagagcattgatttt
ttgcgcaaacataaagagaccactgcacagtcagatgctagtgagattcgacaggactgg
aaacccacattccttagtaatgaagagtttacacagttaatgttagaggctcttgatggt
ttttttttagcgatcatgacagatggaagtataatatatgtatctgagagtgtaacttcg
ttacttgaacatttaccatctgatcttgtggatcaaagtatatttaattttatcccagag
ggagaacattcagaggtttataagatactctctactcatctgctggaaagtgactcatta
acccctgagtacttaaaatcaaaaaatcagttagaattctgttgtcacatgcttcgagga
acaatagacccaaaggagccatccacctatgaatatgtgagatttataggaaattttaaa
tctttaaccagtgtatcaacttcaacacacaatggttttgaaggaactatacaacgcaca
cataggccttcttatgaagatagagtttgttttgtagctactgtcagattagctacacct
cagttcatcaaggaaatgtgtactgttgaagaaccaaatgaagagtttacatctagacac
agtttagaatggaagtttctatttttagatcacagggcaccaccaataataggctatttg
ccatttgaagtcttgggaacatcaggctatgattactatcatgtggatgacctagaaaat
ctggcaaaatgtcacgagcacttaatgcaatatggaaaaggcaaatcgtgttactataga
ttcctgaccaaaggccagcagtggatatggcttcagactcattattatattacttaccat
cagtggaattcaaggccagagttcattgtttgtactcacactgtagtaagttatgcagaa
gttagggctgaaagacggcgagaacttggcattgaagagtctcttcctgagacagctgct
gacaaaagccaagattctgggtctgacaatcgtatcaacacagtgagtctcaaggaagca
ctggaaaggtttgatcacagcccaactccttctgcctcctctagaagctcacgaaagtca
tctcacaccgcagtctcagacccttcctccacaccgacaaagatccctactgatactagc
actcctcccagacagcatttgccagctcatgaaaagatgacacagcggaggtcgtccttc
agcagtcagtccataaactcccagtcagttggtccatcattaacacagccagcgatgtct
caagctgcaaatttaccaattccacaaggcatgtcacagtttcagttttcagctcagtta
ggagccatgcagcatctaaaagaccagctagagcagcggacacggatgatagaggcaaat
attcatcggcagcaagaagaactaaggaaaattcaagagcaacttcagatggtccatggt
caagggctacagatgtttttgcagcaatcaaaccctggattgaattttggttctgttcaa
ctttcctctggaaattctaatatccagcaactcacacctgtaaatatgcaaggccaggtt
gtccctgctaaccaggttcagagtggacatatcagcacaggccagcacatgatacagcaa
cagactttacaaagtacatcaactcagcagagtcaacagagtgtaatgagtggacacagt
cagcagacgtctcttccaagtcagacaccgagcactctcacagccccactgtacaatacg
atggtgatttcccagcctgcagctgggagcatggtccagattccatccagtatgccacag
aacagtacccagagtgctacagtcactacgttcactcaggacagacagataagattttct
caaggtcagcaacttgtgaccaaattagtgactgctcctgtagcttgtggggccgtcatg
gtaccaagtaccatgcttatgggtcaggtggtgactgcctatcctaccttcgccacacaa
cagcagcaggcacagacattatcggtaacacaacagcagcagcagcagcagcagcagcca
ccacagcaacagcaacaacaacagcagagttcccaggaacagcagcttccttcagttcag
cagccagctcaggcccagctgggccagccaccacagcagttcttacagacatctaggttg
ctccacgggaatccttcgacacagctcatcctctctgctgcctttccactacaacagagc
actttccctccttcgcaccaccagcaacaccagcctcagcagcaacagcagcttcctcgg
cacaggactgacagcctgactgacccttccaaggtccagccacagtag
Mus musculus (house mouse): 18143
Help
Entry
18143 CDS
T01002
Symbol
Npas2, MOP4, bHLHe9
Name
(RefSeq) neuronal PAS domain protein 2
KO
K09026
neuronal PAS domain-containing protein 2
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
18143 (Npas2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmu03000
]
18143 (Npas2)
Transcription factors [BR:
mmu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
18143 (Npas2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
PAS_4
FAM101
Motif
Other DBs
NCBI-GeneID:
18143
NCBI-ProteinID:
NP_032745
MGI:
109232
Ensembl:
ENSMUSG00000026077
UniProt:
P97460
Q32ME6
G3X9B7
LinkDB
All DBs
Position
1:39233013..39402321
Genome browser
AA seq
816 aa
AA seq
DB search
MDEDEKDRAKRASRNKSEKKRRDQFNVLIKELSSMLPGNTRKMDKTTVLEKVIGFLQKHN
EVSAQTEICDIQQDWKPSFLSNEEFTQLMLEALDGFVIVVTTDGSIIYVSDSITPLLGHL
PADVMDQNLLNFLPEQEHSEVYKILSSHMLVTDSPSPEFLKSDNDLEFYCHLLRGSLNPK
EFPTYEYIKFVGNFRSYNNVPSPSCNGFDNTLSRPCHVPLGKDVCFIATVRLATPQFLKE
MCVADEPLEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCH
QHLMQFGKGKSCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHSVVSYADVRVER
RQELALEDPPTEAMHPSAVKEKDSSLEPPQPFNALDMGASGLPSSPSPSASSRSSHKSSH
TAMSEPTSTPTKLMAENSTTALPRPATLPQELPVQGLSQAATMPTALHSSASCDLTKQLL
LQSLPQTGLQSPPAPVTQFSAQFSMFQTIKDQLEQRTRILQANIRWQQEELHKIQEQLCL
VQDSNVQMFLQQPAVSLSFSSTQRPAAQQQLQQRPAAPSQPQLVVNTPLQGQITSTQVTN
QHLLRESNVISAQGPKPMRSSQLLPASGRSLSSLPSQFSSTASVLPPGLSLTTIAPTPQD
DSQCQPSPDFGHDRQLRLLLSQPIQPMMPGSCDARQPSEVSRTGRQVKYAQSQVMFPSPD
SHPTNSSASTPVLLMGQAVLHPSFPASRPSPLQPAQAQQQPPPYLQAPTSLHSEQPDSLL
LSTFSQQPGTLGYAATQSTPPQPPRPSRRVSRLSES
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagatgagaaggatagagcaaagagagcctctcgaaataagtctgagaagaag
cgtcgggaccagttcaatgttctcatcaaagagctcagctccatgctccctggtaacact
cggaaaatggacaaaaccaccgtgctggagaaggtcatcggattcttgcagaaacacaat
gaagtctcagcacaaacagaaatctgtgacatccagcaggactggaagccatcattcctc
agtaacgaagaattcacccagctgatgttggaggcattagatggcttcgtcatcgtcgtg
acaacagacggcagcatcatctatgtgtccgacagtatcacacctctccttggacattta
ccggcggatgtcatggatcagaacttgttaaatttccttccagagcaagaacattccgaa
gtttataaaatcctttcttcccatatgcttgtgacggattccccctccccagaattccta
aaatctgacaacgatttagagttttattgccatcttctcagaggcagcttgaacccaaag
gaatttccaacttacgaatatataaaatttgtaggaaattttcgctcttacaacaatgtg
cctagcccctcctgtaatggctttgacaacaccctttcaagaccctgccatgtaccccta
ggaaaggacgtctgcttcatcgccaccgtgcgcctggcaaccccgcagttcttaaaggaa
atgtgtgtagctgacgaacctttagaggaattcacttcgaggcatagcttggaatggaaa
tttttatttctggatcacagagctcctccaatcataggatacctgccctttgaagtactt
ggcacctcaggctacgactactaccacattgatgacctggagctcctggccaggtgccac
cagcatctgatgcagtttggcaaagggaagtcgtgctgttaccggtttctaaccaaaggg
cagcagtggatttggttgcaaacccactactacatcacctaccaccaatggaactccaag
cctgagttcatcgtatgcacacactcagtggtcagttacgcagatgttcgagtggaaagg
agacaggagctggctctggaagacccacccacagaggccatgcacccctctgcagtgaag
gaaaaggactcaagcctagagcctccacagccctttaatgcacttgacatgggcgcctca
ggtcttcccagcagcccttctccatcagcctcctcaaggagttcccacaagtcctcacac
acagccatgtcagaacccacctccactccaaccaagctgatggctgagaacagcaccaca
gctttgccaagaccggccaccctaccccaggagttaccagtgcaggggctcagccaggca
gccacaatgccgactgctctgcattcctcagcctcctgcgacctcacaaagcaactcctg
ctgcagagcctgcctcagaccggcttgcagagtccacctgctccagtgacacagttttca
gcacaattcagcatgttccagaccattaaagaccaactggagcagaggacacggatcctg
caggccaacattcggtggcagcaggaagagcttcataagatccaggaacaactctgcctg
gtccaggactccaacgtccagatgtttctgcagcagccagctgtgtccctgagcttcagc
agtacgcagcgaccagcagctcagcagcagctgcagcaaaggcccgccgcaccgtctcag
ccccagcttgtggtcaacactccactgcaggggcagatcacatccacccaagtcacaaac
cagcacctgctccgagaatcgaatgtgatatccgcccagggtccaaagccaatgagaagt
tcccagctgctgcctgccagcggccgttcactgagcagcctgccatcccagtttagcagt
acagcttccgtgctcccgcctggcctgagcctcaccacgattgctcccacccctcaggat
gacagccagtgccagcccagccctgacttcggccatgatcggcagctcaggctgttgctg
agccagcccatccagcctatgatgcctgggtcctgcgatgccaggcagccctcagaagtc
agcagaactggacggcaagtcaagtatgcacagagccaagtgatgtttccaagtccagac
tcacaccctaccaacagcagcgcatccaccccggtcctgctcatggggcaggcagtactc
catcccagcttccctgcttcccggccatcgccactgcagccagcacaggcacagcagcag
ccaccaccctatttgcaggcaccaacatctctgcacagtgagcagccggactcgctcctt
ctctccaccttctcccagcagccgggaaccctgggctatgcagccacacagtctacacct
ccgcaacccccacgcccctcccgcagggtcagccggctgtcagagtcctaa
DBGET
integrated database retrieval system