Mus musculus (house mouse): 12830
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Entry
12830 CDS
T01002
Symbol
Col4a5
Name
(RefSeq) collagen, type IV, alpha 5
KO
K06237
collagen type IV alpha
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04151
PI3K-Akt signaling pathway
mmu04510
Focal adhesion
mmu04512
ECM-receptor interaction
mmu04820
Cytoskeleton in muscle cells
mmu04926
Relaxin signaling pathway
mmu04933
AGE-RAGE signaling pathway in diabetic complications
mmu04974
Protein digestion and absorption
mmu05146
Amoebiasis
mmu05165
Human papillomavirus infection
mmu05200
Pathways in cancer
mmu05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
12830 (Col4a5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
12830 (Col4a5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
12830 (Col4a5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
12830 (Col4a5)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
12830 (Col4a5)
09154 Digestive system
04974 Protein digestion and absorption
12830 (Col4a5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
12830 (Col4a5)
09162 Cancer: specific types
05222 Small cell lung cancer
12830 (Col4a5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
12830 (Col4a5)
09174 Infectious disease: parasitic
05146 Amoebiasis
12830 (Col4a5)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
12830 (Col4a5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmu04147
]
12830 (Col4a5)
00536 Glycosaminoglycan binding proteins [BR:
mmu00536
]
12830 (Col4a5)
Exosome [BR:
mmu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
12830 (Col4a5)
Glycosaminoglycan binding proteins [BR:
mmu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
12830 (Col4a5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
12830
NCBI-ProteinID:
NP_001156627
MGI:
88456
Ensembl:
ENSMUSG00000031274
UniProt:
Q63ZW6
LinkDB
All DBs
Position
X:140258367..140472232
Genome browser
AA seq
1691 aa
AA seq
DB search
MQVRGVCLAAGWFLLALCLWGQPAEAAACHGCSSGSKCDCSGIKGEKGERGFPGLEGHPG
LPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQG
IPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSPLPGPKGNQGYPGPPG
IQGPPGPKGISGPSGPPGPPGLMGPPGPPGPPGPKGNMGLNFQGPKGEKGEQGLQGPPGP
PGQISEQKRPIDIEFQKGDQGVPGDRGPPGPPGIPGPPGPPGGVKGEKGEPGEAGKRGKP
GKDGETGQPGIPGLPGDPGYPGEPGRDGEKGQKGDIGPPGPPGLVIPAPGTGVTMGEKGN
IGLPGLPGEKGERGFPGIQGPPGFPGPPGTAVVGPPGPPGYPGERGQKGDEGPPGICIPG
SPGLDGQPGAPGLPGPPGPPGPQLPSRDEICKAGPPGPPGPPGDKGLQGERGVKGDKGDT
CFNCIGTGISGPPGQPGLPGLPGPPGSLGIPGEKGDKGQAGITGPKGLPGIPGPPGAPGF
PGSKGDPGDVLTLPGMKGDKGELGFPGAPGLPGLPGSPGKDGLPGLPGPKGEPGGITFKG
ERGPPGSPGLPGLPGNMGPTGPVGFGPPGPIGEKGIQGVAGNPGQPGLPGPKGDPGQTIT
QPGKPGLPGSPGRDGEVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGPPGPPGPKGFPGI
PGPPGAPGAPGRMGPDGPPGPPGFPGPKGEPGFGLPGPPGPPGFPGFKGTPGPKGDRGFP
GPSGPPGRTGLDGLPGPKGDVGPNGQPGPVGPPGLPGIGLQGPPGPPGTPGPIGQPGLHG
IPGEKGDPGPPGFDVPGLPGERGSPGLPGAPGLIGPPGSPGVPGKAGVPGFPGVKGEMGM
MGPPGPPGPLGIPGRSGAPGLKGDDGMQGQPGLPGPAGEKGGKGEPGLPGPPGPMHPDFL
GSKGEKGEPGLPGIPGLSGPKGYQGLPGDPGQPGLSGQPGSPGLPGPKGNPGLPGPPGLT
GPPGPKGNIGDMGFPGPQGVDGPPGPPGFPGQPGSPGLPGQKGSKGEPGVSGIGLPGLPG
PKGEPGLPGYPGNPGIKGSVGETGLPGLPGNPGAKGQPGLPGFPGTPGLPGPKGMNGPPG
NPGFPGEPGPVGAGGRPGPPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGIPGPPGLPGL
SGQKGDGGSPGLPGNPGLPGSKGEPGFQGFPGMPGPPGPPGSPGQALEGPKGNPGPQGPP
GRPGPPGFQGPPGTEGPRGPPGNGGIKGERGNPGPPGQPGLPGLKGDQGPPGLPGNPGRP
GLNGMKGDPGLPGVPGFPGMKGPIGVPGSTGPDGEPGLTGPPGPPGLPGPSGQSIVIKGD
PGPPGIPGQPGLKGLPGLPGPQGLPGPIGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGA
RGLDGPPGPDGLQGPPGPPGTTSVAHGFLITRHSQTTEAPQCPRGTVHIYEGFSLLYVQG
NKRAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMNMEPLKG
QSIQPFISRCAVCEAPAVVIAVHSQTIQIPHCPQGWDSLWIGYSFMMHTSAGAEGSGQAL
ASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVDMSDMFNKPQSETLKAGDLRTR
ISRCQVCMKRT
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtgcgtggagtgtgcctggctgccggctggttcttactggccctgtgtctgtgg
gggcagcccgcagaggctgcggcctgccatgggtgttcttctggatcaaaatgtgactgc
agtggtataaaaggagaaaagggagaacgggggtttccaggtttagaaggtcatccaggt
ttaccaggatttccaggtccagaaggccctccaggacctcggggacaaaagggtgatgat
ggaattccagggccaccaggaccaaaaggaatcagaggtcctcctggacttcctggattt
ccagggacaccaggtcttcctgggatgccaggccatgatggggctccaggacctcaaggt
atccctggatgcaatggaaccaagggagaacgtggatttccaggcagtccgggctttcct
ggtttacaaggtcctccaggacctcctgggatcccaggtatgaagggggaaccaggcagt
ataatcatgtcaccactgccaggaccaaagggtaatcaaggatacccaggtcctcctgga
atacaaggcccacctggtcccaagggtatatcagggccaagtggtcctccaggaccacca
ggtttaatgggacctcctggcccaccaggcccaccgggaccaaaggggaatatgggctta
aatttccagggacccaaaggtgaaaaaggcgaacaaggtcttcagggcccacctggtcca
cctgggcagatcagcgaacagaaaagaccaattgacatagaatttcagaaaggagatcag
ggagttcctggtgatagagggcctcctggacctccaggaatacctggtcctcccggtcct
cctggtggtgtgaaaggtgaaaagggtgagccaggagaggcaggcaaaagaggtaaacca
ggcaaagatggagagactggccaaccaggaatcccaggtttgcctggtgatcctggttac
cctggagaaccaggaagagatggtgaaaagggtcaaaagggtgatattggcccacctgga
cctcccggacttgtaattcctgcacctggaactggtgtgactatgggagaaaaaggaaat
atcgggttacctggtttgcctggagaaaagggagagcgaggatttcctggaatacaaggt
ccacctggctttcctggacctccaggaacagcagttgtgggtccccctggtcctcctgga
tatcctggtgaaaggggccagaaaggtgatgaaggtccccctggaatttgtattcctgga
tctcctggacttgatggacagcctggggctcctggccttccaggacctcctggcccccct
ggcccccagttgccatccagagatgaaatctgtaaagcaggccctcctgggcctccagga
cctccaggtgataaaggactccaaggagagcgaggagtaaaaggtgacaaaggtgatact
tgcttcaactgtattggaactggcatttcagggcctccaggccaacctggtttaccaggt
ctcccaggtcctccaggatctcttggaatccctggagagaagggggacaaaggacaagct
gggataactggtccgaaaggattgccaggcatacctggacctccaggtgctccaggcttt
ccagggtctaagggtgaccctggggatgtcctcactcttccaggaatgaaaggtgacaaa
ggagagttgggtttccctggagctccagggcttcctggtctacctggtagtcctggaaag
gatggtttgccaggactccctggccccaaaggagagcctggtggaattacttttaagggt
gaaagaggtcctcctgggagcccaggtttaccaggtctcccaggaaatatgggacctaca
ggcccagttggttttgggcctccaggccccataggcgaaaaaggcatacaaggtgtggca
ggaaatccaggccagccgggattaccaggtcctaaaggagatccaggccagaccataacc
cagccaggaaagcctggtttgccaggtagtccaggcagagatggtgaagtgggtcttcca
ggtgatcctggacttccaggccaaccaggcctgccaggaatacctggtagcaaaggagaa
ccaggtatccctgggattgggcctcctggaccacctggtcctaaaggttttccaggaatt
ccgggacctccaggagctcctggggcccctggaagaatgggtccagatgggcctcctggg
ccaccaggcttcccaggaccaaagggagagccaggatttgggttacctgggccacctggg
ccaccaggattcccaggtttcaaaggaacacctggtccaaaaggtgatcgtggtttccca
ggaccttcaggtcctccaggacgcactggcttggatgggctacctggaccaaaaggtgat
gttggaccaaatggacaacctggcccagtagggcctccagggctgccaggaattggtctt
cagggaccaccaggaccaccagggactccagggccaataggccaacctggcttacatggg
attccaggagagaagggggacccaggacctcctgggtttgatgttccaggactccctgga
gagagaggtagtccagggctccctggagcccctggtcttataggacctccaggatcacct
ggtgtccctggaaaagcaggtgtccctggatttccaggtgtcaaaggcgaaatgggtatg
atgggacctccaggcccacctggacctttgggaattcctggcaggagtggtgctcctggt
cttaaaggtgatgatggcatgcaaggtcagccaggtctccctggccctgcaggagaaaag
ggcggtaagggagagcctggccttccaggtcctcctggaccaatgcatccagatttcctg
ggatcgaaaggagaaaagggtgagcccggcttaccaggtattcctggactttcaggacca
aaaggctaccagggattacctggagacccagggcaacctggactgagtggacaaccagga
tcaccaggactcccaggtcccaagggtaatcctggtctccctggtccaccaggacttaca
ggacctcctggaccaaaaggaaacattggtgacatgggttttcctggccctcaaggtgta
gatgggccccctggacctcctggatttcctggacaacctggctctcctgggttacctggc
cagaaaggaagtaaaggagagcctggggtttcaggcattggacttccaggtcttcctggc
ccaaagggtgaacctggtctgcctggatatccaggaaacccaggtatcaaagggtcggtg
ggagagactggtcttcctggattaccaggaaaccctggagcaaaaggtcaaccgggcctg
cctggattcccaggaacaccaggacttcctggaccaaaaggtatgaatggtcctcctggt
aaccctggctttcccggagaacctggtcctgtaggtgccggagggcgtcctggaccacca
ggacctcctggtgaaaaaggcaagccaggtcaagatggcattcctgggccagcaggacaa
aagggagaaccaggtcaaccaggctttggaatcccaggacctcctggactcccaggactt
tctggacaaaagggtgatggaggatcacctggacttccaggaaatcctggccttccaggt
tcaaagggtgagccaggctttcagggattccctggtatgccaggtcccccaggtcctcct
ggttctcctggtcaagctttggaaggtcccaaaggaaaccctgggcctcaaggccctcct
gggagaccaggtcctccaggttttcaaggtccaccaggtacagaaggtcctcgtggaccc
cctggaaatggaggtatcaaaggagagaggggaaatccaggcccacctgggcagccaggc
ttacctggtttgaaaggagatcaaggaccaccaggactcccgggtaaccctggccggcca
ggtcttaatggaatgaaaggagatcctggtctccctggtgttccaggattcccaggaatg
aaaggacccattggagtaccaggctccactggccctgatggggaaccaggtcttactggg
cccccaggtcctcctgggttgcctggtccttcaggacagagtattgtaatcaaaggagat
cctggacctccagggattcctggacaacctggattaaaaggtctaccaggacttccaggc
cctcaaggcctaccaggtccaattggccctccaggagatccaggacgcaatggactccca
ggctttgatggtgcaggagggcgcaaaggagacccagggctgccaggacagccaggtgcc
cgtggattggatggtcccccaggaccagatggattgcaaggacctccaggaccccctgga
accacctctgttgcccatggattcctcatcacacgtcacagtcaaacaacagaagcacca
caatgcccacggggaacagttcatatctatgaaggcttttctctcctgtatgtacaagga
aataaaagagcccatggtcaagacttgggtacggctggcagctgccttcgtcgcttcagt
accatgcctttcatgttctgcaacattaacaacgtttgtaactttgcttcaagaaatgac
tattcttactggctttccaccccagagcccatgccaatgaacatggaacccctgaaggga
cagagcatccagccattcattagtcgatgtgcagtgtgtgaggcgccagctgtggtgatc
gctgttcacagccagactattcagattccacactgtcctcaggggtgggactctctgtgg
attggctattccttcatgatgcatacaagtgcaggagcagaaggctctggccaagcccta
gcctctcctggctcctgtttggaagaatttcgttccgctcccttcatcgaatgtcatggg
cgagggacatgcaattactatgccaattcgtacagcttttggctggccactgttgatatg
tcagacatgttcaacaaacctcagtcagaaaccctgaaagcaggagacttgaggacgcgt
attagccgatgtcaagtatgcatgaagaggacataa
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