Mus musculus (house mouse): 12831 Help Entry 12831             CDS       T01002                                  Symbol Col5a1 Name (RefSeq) collagen, type V, alpha 1   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism mmu  Mus musculus (house mouse) Pathway mmu04820   Cytoskeleton in muscle cells mmu04974   Protein digestion and absorption Brite KEGG Orthology (KO) [BR:mmu00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     12831 (Col5a1)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     12831 (Col5a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:mmu00536]     12831 (Col5a1) Glycosaminoglycan binding proteins [BR:mmu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    12831 (Col5a1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_1 Motif Other DBs NCBI-GeneID:  12831 NCBI-ProteinID:  NP_056549 MGI:  88457 Ensembl:  ENSMUSG00000026837 UniProt:  O88207 B1AWB9 LinkDB All DBs Position 2:27776393..27929522 Genome browser AA seq 1838 aa AA seqDB search MDVHTRWKAARPGALLLSSPLLLFLLLLWAPPSSRAAQPADLLEMLDFHNLPSGVTKTTG FCATRRSSSEPDVAYRVSKDAQLSMPTKQLYPESGFPEDFSILTTVKAKKGSQAFLVSIY NEQGIQQLGLELGRSPVFLYEDHTGKPGPEEYPLFPGINLSDGKWHRIALSVYKKNVTLI LDCKKKITKFLSRSDHPIIDTNGIVMFGSRILDDEIFEGDIQQLLFVSDNRAAYDYCEHY SPDCDTAVPDTPQSQDPNPDEYYPEGEGETYYYEYPYYEDPEDPGKEPAPTQKPVEAARE TTEVPEEQTQPLPEAPTVPETSDTADKEDSLGIGDYDYVPPDDYYTPPPYEDFGYGEGVE NPDQPTNPDSGAEVPTSTTVTSNTSNPAPGEGKDDLGGEFTEETIKNLEENYYDPYFDPD SDSSVSPSEIGPGMPANQDTIFEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLP GPPGTTGPTGQMGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVS AQESQAQAILQQARLALRGPAGPMGLTGRPGPMGPPGSGGLKGEPGDMGPQGPRGVQGPP GPTGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGIPGDD GERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPP GQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPP GPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGED GPEGPKGRGGPNGDPGPLGPTGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGR GTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFP GPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPP GPPGEQGLPGAAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGSEGPP GPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGLPGEKGPQGPAGRDGLQGPV GLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEP GPRGQQGLFGQKGDEGSRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPS GAPGADGPQGPPGGIGNPGAVGEKGEPGEAGDPGLPGEGGPLGPKGERGEKGEAGPSGAA GPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPT GEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLR GIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEK GDRGLPGPQGSSGPKGDQGITGPSGPLGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHP GLPGPPGPPGEVIQPLPIQASRTRRNIDASQLLDDGAGESYVDYADGMEEIFGSLNSLKL EIEQMKRPLGTQQNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGSTC VFPDKKSEGARITSWPKENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMTFLRLLSASAHQ NVTYNCYQSVAWQDAATGSYDKAIRFLGSNDEEMSYDNNPYIRALVDGCATKKGYQKTVL EIDTPKVEQVPIVDIMFNDFGEASQKFGFEVGPACFLG NT seq 5517 nt NT seq  +upstreamnt  +downstreamnt atggacgtacacacccgctggaaagctgcgcgcccaggcgccctgctgctgtcttcgccg ctactcctgttcctgctgctgctgtgggcgccgccttcgagccgcgcagctcagccagca gatcttctggagatgctagattttcacaatttgccctcaggggtaacgaaaaccacaggt ttctgtgctactcgaagatcttccagcgagccggatgttgcctaccgagtctctaaagat gcacagctcagcatgcccaccaagcagctgtaccctgagtctggttttcccgaggacttc tccatcctgacaaccgtgaaagccaagaaaggcagccaggccttcctagtctccatttac aatgagcagggcatccagcagttggggctggagctgggccgctcccctgtcttcctctat gaggaccacacagggaagcccgggcctgaagagtatccgcttttccctggcatcaacttg tccgatggcaagtggcaccgaattgctctcagtgtctacaagaaaaatgtcaccttgatc ctcgactgtaagaagaagattacgaagttcctcagccgcagtgaccaccccataatagac accaatgggattgtcatgtttggctcccggattctggatgatgaaatatttgagggtgac atccaacagttgcttttcgtctctgacaaccgagctgcctatgactactgtgagcactac agccccgactgtgacactgcggtccctgacacacctcagtcacaggaccctaacccggat gaatattacccagaaggagagggtgagacctattactatgagtatccatattatgaagac cctgaagacccgggaaaggagcctgcccctactcagaagccagtggaagctgccagagaa accacagaggttcctgaggagcagacccagcccctacccgaagcccctacagtgcctgag accagtgacacggctgacaaggaggacagtctagggatcggggactatgactacgtgccc ccagatgactattacactccacccccatatgaagactttggatatggcgagggtgtggag aaccctgaccagcccaccaaccccgactcaggggctgaggtccccaccagcaccactgtt acctccaacacctccaatccagctccaggagaagggaaggatgacctgggcggcgaattc accgaggaaaccatcaagaatctagaggaaaactactatgacccgtactttgaccccgac tccgactccagtgtctctccatcagagatagggccaggcatgcccgctaaccaggacacc atctttgaggggattggaggaccccgaggtgagaaagggcaaaagggagaaccagccatc attgagccggggatgctgatcgaggggccccctggccctgaaggccctgctggtcttcca ggacctccaggaactacaggtcctactggccaaatgggtgaccctggagaaaggggtccc cctgggcgcccaggtcttcctggagctgatggcttgcctggccccccaggtaccatgctc atgctgccgttccggtttggaggcggtggcgatgccggttctaagggccccatggtctct gcgcaggagtcccaggcccaggctatcctccagcaagccaggttggcactgaggggacca gctggcccaatgggtctcaccgggagacctggccccatgggtcctcctgggagtggcggt ttgaaaggtgagccaggagacatgggacctcagggtcctcgaggtgtgcaaggcccacct ggcccaacagggaagcctggaagacggggccgtgctggaagtgatggagccagaggcatg cctggacaaacaggccccaagggtgaccgtggctttgatggtctggctgggttgccggga gagaaaggccatagaggtgaccctggtccttctggcccgcccggaatcccaggagatgat ggagaaaggggtgacgatggagaagttgggcccaggggactgcccggggagcctggacca cgtggtctgcttgggccaaaaggccccccagggcctcctggacctcctggtgtaacgggt atggatggccagcctggcccaaaaggaaatgtgggtccccagggagagcctgggccgcca ggacagcagggtaatcctggtgcccagggtcttccaggtccccagggtgccattggtcct ccaggagaaaagggtcctttggggaaaccaggtctcccaggaatgccaggcgctgatgga cccccggggcaccctggaaaagaaggtcctccaggagagaaaggaggccagggtcctcct ggcccccagggtcccattggctaccccggtccacgaggagtcaagggggcagatggcatc cgaggtctgaagggcaccaagggggagaagggtgaagacggcttccctgggtttaaaggc gacatgggaataaagggtgaccggggggaaatcggcccacctggtccccgaggagaagat ggtcctgaaggtccaaagggtcgaggtggtcccaatggtgatcctggtcccctggggccc actggggaaaagggaaagcttggcgtgcccggattaccggggtacccaggaagacaaggg ccaaagggttccattggattccctggcttcccgggcgccaacggagagaagggtggcagg gggacacctggaaagccaggaccacggggacagagaggcccaacgggcccgcggggtgaa cgaggcccacgaggcatcacggggaagcctggccctaagggcaactccggaggtgatggc ccagctggccctcctggtgaacggggacccaacggaccccaaggtcccaccggctttcct ggacccaagggtcccccgggcccaccaggcaaggacggactccctggacaccctgggcag agaggggagaccggtttccaaggcaagactggccctccagggcccccaggagtggttggc cctcagggtcccacaggagagacgggccccatgggtgagcgtggccatcctggtcctcca ggccctcctggtgaacagggcctcccaggtgctgctgggaaagaaggaacgaagggtgac ccaggtcctgctggcctccctgggaaggatggccctccaggattgcgtggattccctggg gaccgagggctacctggccccgtgggagcccttggactcaaaggcagtgaaggcccccct ggcccaccaggtcctgcgggttctccaggggagagaggaccagctggtgccgctgggccc atcggaattccagggagacctgggcctcagggacctccggggcctgctggagagaaagga cttcctggcgagaaaggtccacaaggcccagctggccgagatggcctccaaggtcccgtg gggctccctggaccagccggcccagtgggtcctcctggagaagatggagataagggagag atcggagagccagggcagaagggaagcaagggcgacaaaggcgagcagggtcctcctggg cctaccggtcctcaaggcccgattggacagccaggcccttcgggagcagatggtgaacct ggccctcgtggacagcagggcctgtttgggcagaaaggagatgaaggttcaagaggtttc ccaggaccccccgggccagtgggattgcagggtttgccaggacctccaggagaaaagggc gagacaggagacgtgggccagatgggccctcctggtccaccaggcccccgaggaccctct ggagctccaggtgccgatggaccacagggtcctcctggagggattggcaaccctggtgca gtcggagaaaagggagaacctggtgaagctggagatcctggccttccaggagaaggaggt cccctgggacctaaaggagaaagaggggagaagggagaggctggcccctctggtgctgct ggaccccctggacccaaaggccctcctggagatgatggccccaaaggcagccctggccct gtgggctttcctggagatcctggtccccctggagagccaggccccgcaggtcaagacggc ccacctggtgacaaaggggacgatggtgaacctgggcagacggggtccccgggccctact ggtgaacctggtccatctgggcctccaggaaagaggggtcccccaggccctgcaggccct gaaggcaggcagggggagaaaggagccaagggagaagctggcttagaaggccctcctggg aagactggccccattggcccccaaggggcccctgggaagcctggccccgatggtctccgt ggaatccctggtcctgtgggtgagcaaggcctcccaggatccccaggccccgatggtcca cccggccccatgggtcctccaggactccctggcctcaaaggagactccggtcccaaaggt gaaaagggccatccaggcctgattggactcatcggccctccgggagagcaaggtgaaaag ggtgaccgtggactcccaggcccccagggttcatctggtcctaaaggagatcagggcatc acaggtccttctggcccacttgggcctcctggtcctcctggcttgccgggccctccaggt cccaaaggtgctaagggctcttcgggtcccaccggcccgaagggtgaggcaggccaccca ggactccccggcccacctggccctccgggtgaggtcatccagcccctgccaatccaggcc tccaggactcggcggaacattgatgccagccagctcctggacgatggggctggggagagc tacgtggattatgcagatggcatggaagagatctttggttccctcaactccctgaagctg gagattgaacagatgaagcgaccactgggcacccagcagaacccagcccgtacctgcaag gatctacagctctgtcatcctgacttcccagatggcgaatactgggtcgatcccaaccaa gggtgctccagggactccttcaaagtctactgcaatttcacagctggagggtccacgtgc gtcttccctgacaagaagtctgagggagccagaatcacttcttggcccaaagaaaaccca ggttcctggttcagtgaattcaagcgtgggaaactgctctcctatgtggatgctgaaggc aaccccgtgggcgtggtacaaatgaccttcctgcggctgctgagcgcctctgcccaccag aacgtcacctacaactgctaccagtccgtggcctggcaggatgccgccacaggcagctat gataaggctatccgcttcttgggctccaacgatgaggaaatgtcttatgataacaacccc tacatccgtgccctggtggatggctgtgctaccaagaaaggctaccagaagacggtgctg gagatcgacacgcccaaagtagagcaagtccccattgtggacatcatgttcaacgacttt ggcgaagcctcacagaaatttggatttgaagtggggccagcttgcttcctaggctag

DBGET integrated database retrieval system